| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3551 |
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| Symbol | |
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| ID | 5385072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4012251 |
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| End bp | 4013819 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866567 |
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| Product | ABC dipeptide/oligopeptide/nickel transporter, periplasmic dipeptide/oligopeptide/nickel-binding protein |
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| Protein accession | YP_001402505 |
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| Protein GI | 153949524 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAA AAGTTCTGTC ATTATTCGTT CTGGCAGCGT TATCTGGCGG CACATTGGCA
GCAACGCCGC CGGATACGCT GATAGTCGTG CAATCCCTGG ATGACATCGT CAGCCTTGAC
CCCGCAGAAA GTAACGAGCT GTCTAGCATT CAGACAGTAC CGAGCCTCTA TCAGCGCTTA
GTTCAAGCCG ACCGCGATAA CCCGGCAAAA GTAGTACCCG TCCTGGCCGA AAGCTGGGAA
GGCGATGCCG CAGCCAAAAC ATTAACGGTC AAATTGCGTC CACAGGCGGT ATTTGCATCG
GGTAATCCGG TACAAGCCGA TGACGTCATT TATTCTTTCA CCCGCGCAGT GAAAATGAAT
CGCTCACCTG CTTTTATTCT CAACGTCTTG GGCTGGCAGG CTGATAACAT CGATCAACAC
CTAAAGAAAA TTGATAATAA TACCGTGCAA GTAAGCTGGA GTGCAGATGT CAGCCCAGCG
GTTGCCTTGA ATATTTTATC AACGCCCATT GCATCCATTG TTGATAAAAA AACCGTGACG
GCGAATACCA AAGATGACGA TTACGGTAAT GCGTGGCTCA AAATGCACTC TGCCGGTAGC
GGCGCCTTCA AAATGCGGGT TTATCAGCCG CACCAAGCCA TTGTGCTGGA TGCCAACCCT
ACGTCACCGG GTAATCAGCC ATTAATTAAG AATATTATTA TTAAAAACGT GCCTGACCCC
AGTGCCCGCC GCCTGTTAAT TCAACAAGGT GATGCTGATA TTGCACGGGA ATTAGGGCCG
GACCAAATTA CTGCGCTGAA AACACAGGCC GGCGTCAAGG TCGTTGAAAT CCCATCAGCA
GAACAAAACT ATTTGGTGTT TAACACCGCT AATGCCGCTA ACCCGCTGCT GAGCAGGCCA
GAACTCTGGC AAGCAGCCCG TTATCTGGTG GATTACCAAG GTATTACCAA AGATCTGTTG
AAAGATCAGT ATTTCATTCA TCAAAGCTTC CTCCCCGTTG GTTTGCCTGG GGCATTGGCA
AGCAATCCAT TCACTTTTGA TCCGGCCACC GCCAAAAAAA TTCTGGCTAA AGCGGGCATT
AAAGATGCCA CACTGACACT GGATGTTGAG AACAAACCCC CGTTTATCAC CATTGCTCAG
TCGTTACAGG CCAGCTTTGC GCAGGGGGGG GTGAAACTGG TATTGCTGCC AGCAGCAGGT
AGCCAAGTTT ATGGTCGGGT GCGGGCTAAA CAGCATCAAT CGGCGATTCG CCTGTGGATC
CCGGATTATT TCGATGCACA CTCCAATGCC AGCACCTTCG CTTATAACGA CGGTAAAAGC
AGTACGGTGG CGGGCCTAAA CGGCTGGGTT ATTCCTGAAC TGAATAAGCA AACACTGGCT
GCCGTCGCTG AAGCAGATCC AGAAAAACGG ACTCAGTTGT ACACCCAGTT ACAGCAGGAA
CTGCAGCAAA ACTCGCCTTA TATCTTTATT GATCAAGCCA AAGCACAAGT TGTGTTACGA
GATAATGTAA AAGGCTATCA ACAAGGTCTG AATGCCGATA TGGTCTATTA TGATCGTGTC
AGTAAATAA
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| Protein sequence | MKAKVLSLFV LAALSGGTLA ATPPDTLIVV QSLDDIVSLD PAESNELSSI QTVPSLYQRL
VQADRDNPAK VVPVLAESWE GDAAAKTLTV KLRPQAVFAS GNPVQADDVI YSFTRAVKMN
RSPAFILNVL GWQADNIDQH LKKIDNNTVQ VSWSADVSPA VALNILSTPI ASIVDKKTVT
ANTKDDDYGN AWLKMHSAGS GAFKMRVYQP HQAIVLDANP TSPGNQPLIK NIIIKNVPDP
SARRLLIQQG DADIARELGP DQITALKTQA GVKVVEIPSA EQNYLVFNTA NAANPLLSRP
ELWQAARYLV DYQGITKDLL KDQYFIHQSF LPVGLPGALA SNPFTFDPAT AKKILAKAGI
KDATLTLDVE NKPPFITIAQ SLQASFAQGG VKLVLLPAAG SQVYGRVRAK QHQSAIRLWI
PDYFDAHSNA STFAYNDGKS STVAGLNGWV IPELNKQTLA AVAEADPEKR TQLYTQLQQE
LQQNSPYIFI DQAKAQVVLR DNVKGYQQGL NADMVYYDRV SK
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