| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3541 |
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| Symbol | |
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| ID | 5386000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4000767 |
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| End bp | 4001843 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866557 |
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| Product | putative permease |
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| Protein accession | YP_001402495 |
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| Protein GI | 153949000 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000000398482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGTG TATTAGACCG CTATATCGGA CGGACTATCC TCAATACTAT CCTGATGACG
TTATTAATGT TGGTGTCGCT GTCGGGCATC ATCAAGTTTG TCGATCAGTT GCGTAAAGTC
GGGCAGGGGG ACTACTCGGC GGCCTCTGCG GGTATGTACA CTATCCTGAG CATCCCTAAG
GACATCGCGG TTTTCTTCCC GATGGCGGCC CTCTTAGGGG CATTACTGGG GCTTGGGACT
TTAGCCAGTC GCAGTGAGTT GGTAGTTATG CAAGCGTCAG GTTTTACCCG GATGCAAATC
GCAGCGTCAG TGATGAAAAC GGCAATCCCT CTGGTGTTGC TGACGATGGC TATCGGTGAG
TGGGTGGCAC CGCAAGGTGA GCAGACCGCG CGTAATTTCC GGACACAGCA GATGTACGGT
GGTTCGTTAC TCTCAACTCA GTCGGGTTTA TGGGCGAAAG ATGGCTCTGA CTTTATTTAT
ATTCAGCGGG TGTCTGGCGA AAGCGAGTTG ACGGGTGTCA ATATTTATCA TTTTGATAAA
GAAGATCGTC TGCTTTCGGT GCGGTATGCG GCGACGGCGA CCTATGAAAA AGACAATAAA
ACCTGGCGGT TATCGCAGGT CGATGAATCT GATTTAAGTA ATCCTACTCA GGTGACAGGT
TCACAGACGC TGACCGGCGA GTGGAAGACC AATCTGACGC CTGAGAAGTT GGGTGTGGTG
GCGATGGATC CAGATTCGCT CTCCATTAGC GGGTTGCACG ACTACAGTAA ATATCTACAG
CAAAGTGGCC AAGAGTCTAA CCGCTACGAA CTGAGTATGT GGAGCAAGGT ATTTGCTCCC
TTCTCTGTTG CGGTCATGAT GCTGATGGCG CTGTCGTTTA TTTTTGGCCC ATTGCGCAGC
GTGCCAATGG GTGTCCGGGT GGTCACCGGT ATTTTCTTCG GCTTTGTTTT CTACGTGCTG
GATCAAGTTT TTGGTCGACT TAGCTTGGTT TATGGCATCC CACCAATGCT GGGTGCGCTG
TTGCCGAGTA TGTTATTCCT TCTGATCAGC ATTTGTTTGC TGCTAAAACG GCGGTAA
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| Protein sequence | MFGVLDRYIG RTILNTILMT LLMLVSLSGI IKFVDQLRKV GQGDYSAASA GMYTILSIPK
DIAVFFPMAA LLGALLGLGT LASRSELVVM QASGFTRMQI AASVMKTAIP LVLLTMAIGE
WVAPQGEQTA RNFRTQQMYG GSLLSTQSGL WAKDGSDFIY IQRVSGESEL TGVNIYHFDK
EDRLLSVRYA ATATYEKDNK TWRLSQVDES DLSNPTQVTG SQTLTGEWKT NLTPEKLGVV
AMDPDSLSIS GLHDYSKYLQ QSGQESNRYE LSMWSKVFAP FSVAVMMLMA LSFIFGPLRS
VPMGVRVVTG IFFGFVFYVL DQVFGRLSLV YGIPPMLGAL LPSMLFLLIS ICLLLKRR
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