| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3536 |
|---|
| Symbol | |
|---|
| ID | 5385159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3991753 |
|---|
| End bp | 3994344 |
|---|
| Gene Length | 2592 bp |
|---|
| Protein Length | 863 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640866551 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_001402490 |
|---|
| Protein GI | 153948702 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATAAAC AGCAGCTTGC GGCAAAAATC TGGGAATCCG CCAACCAGAT GCGTTCTAAA
ATTGAAGCCA ATGAATACAA AGATTACATA CTCGGCTTTA TCTTCTACAA GTACCTAAGC
GACCAGTTGG TGCAGTTTGT CACCAGACAG GGTATGACGC CCGAAGATAT CAAAGCCCTC
AATGAAGAAG ACGCCGACAC CGTTAAATAC GTGCAAGGCA ACCTGGGCTA CTTTATTGCC
TACGATAATC TGTTTTCTAC CTGGGTTGAT TCCACATCCG ACTTTGATGA ATCTAACGTA
CGTGATGCGC TCTCAGCCTT TAGCCGTTTG ATTTCGCCAA CTTACAAAAA ACTGTTTGAA
GGCATTTTTA CCACCTTAGA AACCGGTTTA AGCAAACTGG GTGAAAGTGC GGGCAAACGC
ACCAAAGCCA TCAGCGACTT ACTGCACCTG ATCAAAAGCA TCCCCATGAA TGGTAATCAA
GGGTATGACG TACTGGGCTA CATTTACGAA TACCTGCTTG AGAAATTTGC CGCCAATGCA
GGTAAAAAAG CCGGTGAGTT TTACACGCCT CATGAAGTCT CAGTACTCAT GTCGAACATC
ATTGCCTACG AGTTAAAACA CAAAGATACC ATCAAAATTT ACGACCCGAC CTCCGGCTCG
GGTTCGTTGC TGATCAATAT CGGTGAGGCA TTCGAGAAAT ACGCTAAAAA CAAAGACAGC
ATCACCTATT ACGCCCAAGA GTTAAAAGCC AATACCTACA ACCTAACCCG TATGAACCTC
ATCATGCGCG GTATCAAAGC CAGCAACATT AAAACCCGTA ATGGCGACAC CCTGGAAGAC
GATTGGCCGT TTTTTGATGA TAGCGATCCT CAAGGATCAT ATTACGCCTT GCACGTCGAT
GCCGTAGTAT CCAACCCGCC TTACTCACAA AACTGGGACC CCAGCTTTAA AGACAGCGAT
CCACGCTATT CACGTTTTGG CCTGGCCCCT AAAACCAAAG CCGATTTTGC TTTTTTGCTG
CACGACCTCT ACCACCTAAA ACCCGATGGC ATTATGGCCA TTGTTCTGCC CCATGGTGTC
TTGTTCCGTG GCGGTGAAGA AGGTCAAATT CGCAAGCAAC TCATTGAGCA GAATCACATT
GATACTATTA TCGGTTTACC GGCCAATATC TTTTTTGGCA CCGGCATTCC CACAGTGATT
TTGGTACTCA AGCAAAAACG CCAAAACACC GATGTATTAG TGATCGATGC CTCCAAGCAC
TTTATGAAAG AAGGCAAAAA CAACAAACTG CAAGCCAGTG ACATCAAGCG CATCACTGAT
GCGGTGATTA ACCGCGAAAG TATCGATAAG TTCTCGCAAC GGGTGAGCAA ACAAACCCTG
CGCGACAACG GCTACAATCT CAACATACCG CGCTATGTGG ATTCCTCTGC GGCGACACCA
AGCTGGGATT TACACGCCAC TATGCTCGGC GGCATCCCCA ACAGCGAAAT TGCCGAGCTA
CACAATTATT GGCAAGCCTT CCCGCAATTG CACGATACTC TGTTTACGCC AAAATCCGCC
GCTTACAGTG AGCTGGCCAT TGCCAAACAA GACGTCAACG CCAGTATTAG TGGGCATCCG
CAAGTGTTAG CGTTTATCAG CGCCTACAAC CAAACCTTTA ATGGCTTTGA TGATTACCTA
AACACCCAGT TAATACAAAA CTGGCACAGC GTAAAGCGTA ACCAACAAGA GGCGGTATTA
AGTACCGAGC TATTTACTCG CTTAGCTCCC ATTGCCCTCA TCGACAAATA CCAGGCTTAC
CAATTTCTAA ACAACCAATG GCAGCTCATC AGCGCCGATT TAGAAATGAT GCAAACCGAA
GGCTTTGCCG CCGCCAAACA AGTTGATGCC AATATTGTTA TAAAGAAAAA AAACGGCCAG
GACACTGAAG TGCAAGACGG CTGGAGAGGC CACATACTGC CCTTCGATTT AGTGCAACAA
ACTTATTTAA GTGATGATTT ACAAGCTCTG GCCGCTAAAG AAACCCGCCT GGCAGAAATC
GCCAGCATGC TGGAAGAAAT TTTAGAATCC CTAACCGAAG AAGAAAAAGA ACAAGATACG
GTCAAAGAAA GCCAAGACGG CTTTGCCAAT GCCGAATTAA GTAAGGCAGC CAAAGTCTTC
TTGAAAGAGC AAAAAGATGC CAAAACTAAA TTTGCCGAAG ACAGCTATGA AGCCAAAATC
ATTCGTGCGA ACAAATTAAT CGATGAAGAA AAAACCCTGA AAAAAACCGT CAAAGATGCC
GCCACTGCCC TGCACTTAAA AACCAAAACA ACTATCGAAG CATTAACTGA TGAACAAGTG
AACAACCTGC TGCACCTTAA ATGGATTGCG CCATTAAGCA CCGAACTCGC TGCTATGCCA
AACGCCGTAA TTAGCCAACT CACTAGCCAA GTGCAAGCCC TTGCTGATAA ATACGCCGTC
ACTTACTCGC AAGTGGCCAA TGAGATAAAA AACACCGAGC AAGAACTGGC GCAGATGATG
AGCGAGCTAA CAGGTAATGA ATTTGATATG CAGGGCTTGG CTGAACTCAC CCGCTTACTG
AAGGGTGAAT AA
|
|---|
| Protein sequence | MNKQQLAAKI WESANQMRSK IEANEYKDYI LGFIFYKYLS DQLVQFVTRQ GMTPEDIKAL
NEEDADTVKY VQGNLGYFIA YDNLFSTWVD STSDFDESNV RDALSAFSRL ISPTYKKLFE
GIFTTLETGL SKLGESAGKR TKAISDLLHL IKSIPMNGNQ GYDVLGYIYE YLLEKFAANA
GKKAGEFYTP HEVSVLMSNI IAYELKHKDT IKIYDPTSGS GSLLINIGEA FEKYAKNKDS
ITYYAQELKA NTYNLTRMNL IMRGIKASNI KTRNGDTLED DWPFFDDSDP QGSYYALHVD
AVVSNPPYSQ NWDPSFKDSD PRYSRFGLAP KTKADFAFLL HDLYHLKPDG IMAIVLPHGV
LFRGGEEGQI RKQLIEQNHI DTIIGLPANI FFGTGIPTVI LVLKQKRQNT DVLVIDASKH
FMKEGKNNKL QASDIKRITD AVINRESIDK FSQRVSKQTL RDNGYNLNIP RYVDSSAATP
SWDLHATMLG GIPNSEIAEL HNYWQAFPQL HDTLFTPKSA AYSELAIAKQ DVNASISGHP
QVLAFISAYN QTFNGFDDYL NTQLIQNWHS VKRNQQEAVL STELFTRLAP IALIDKYQAY
QFLNNQWQLI SADLEMMQTE GFAAAKQVDA NIVIKKKNGQ DTEVQDGWRG HILPFDLVQQ
TYLSDDLQAL AAKETRLAEI ASMLEEILES LTEEEKEQDT VKESQDGFAN AELSKAAKVF
LKEQKDAKTK FAEDSYEAKI IRANKLIDEE KTLKKTVKDA ATALHLKTKT TIEALTDEQV
NNLLHLKWIA PLSTELAAMP NAVISQLTSQ VQALADKYAV TYSQVANEIK NTEQELAQMM
SELTGNEFDM QGLAELTRLL KGE
|
|---|
| |