Gene YpsIP31758_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3529 
SymbolfrwC 
ID5385685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3984623 
End bp3985705 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content54% 
IMG OID640866544 
Productputative fructose-like permease EIIC subunit 2 
Protein accessionYP_001402483 
Protein GI153948837 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1299] Phosphotransferase system, fructose-specific IIC component 
TIGRFAM ID[TIGR01427] PTS system, fructose subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGC TGATAAATAT ACTTAAAAAT ACGCGCCAAC ATCTGATGAC GGGCGTTTCA 
TATATGATCC CTTTTGTGGT TGCTGGCGGT ATTTTGCTAG CACTTTCTGT GATGCTTTAC
GGTAAAGGTG CGGTGCCAGA GGTTGCCAGT GACCCTAATC TGAAAAAGCT ATTCGATATT
GGTGTCGTGG GCTTGACGTT GATGGTGCCA TTTTTGGCAG CCTATATCGG TTACGCCATT
GCGGATCGTG CGGCGCTCGC CCCGGCGGCT ATCGGTGCTT GGGTAGGGGC TTCTTTCGGG
GCTGGTTTTT TTGGTGCCAT TATCGCGGGC TTGCTGGGCG GTATTATCGT TTTCTATCTG
AAGAAGATCT CCGTGCCAAA GACGCTGCGT TCGGTGATGC CGATCTTCGT GATCCCGATA
GTCGGTACCC TTCTCACCGC TGGGATCATG ATGTGGGGCT TGGGTGAACC CATCGGCATC
CTGACAGCCA ACCTCACGCA ATGGCTACAG GGTATGCAGC AAGGAAGCGT TATATTACTG
GCAATTATTA TGGGCCTGAT GCTGGCGTTT GATATGGGCG GGCCGGTCAA CAAGGTGGCT
TATGCCTTTA TGTTGATCTG TGTGGCGCAG GGTGTTTATA CCTTGGTGGC CGTCGCCGCC
GTCGCCATTG CAACCCCGCC GTTGGGCATG GGCCTTGCCA CGCTGATTGG CCGTAAATAT
TACTCGGTGG AAGAACGTGA AGCAGGTAAG GCCGCGATGC TGATGGGCTG CGTTGGCATT
ACTGAGGGGG CTATCCCGTT TGCCGCCGCC GATCCACTGC GTGTCATTCC TGCCAATATG
ATCGGTTCCG CCTGCGCCGC CGTGACTGCC GTGTTGTTCG GTGCCCAATG CTATGCCGCT
TGGGGAGGGT TGATCGTGCT ACCGGTGGTC GACGGTAAAC TGGGCTTTGT GGTGGCCTTG
TTCGTCGGCA TGGTCGTTAC CGCGTTGATA GCCAATCTAT TAAAGCGTTT CACCGCCCAA
AAGCAGCCGG GAAGGTCATC AGCAGAGGGC GATGTGGACA TGGATTTCGA TATTAAAAAT
TAG
 
Protein sequence
MKELINILKN TRQHLMTGVS YMIPFVVAGG ILLALSVMLY GKGAVPEVAS DPNLKKLFDI 
GVVGLTLMVP FLAAYIGYAI ADRAALAPAA IGAWVGASFG AGFFGAIIAG LLGGIIVFYL
KKISVPKTLR SVMPIFVIPI VGTLLTAGIM MWGLGEPIGI LTANLTQWLQ GMQQGSVILL
AIIMGLMLAF DMGGPVNKVA YAFMLICVAQ GVYTLVAVAA VAIATPPLGM GLATLIGRKY
YSVEEREAGK AAMLMGCVGI TEGAIPFAAA DPLRVIPANM IGSACAAVTA VLFGAQCYAA
WGGLIVLPVV DGKLGFVVAL FVGMVVTALI ANLLKRFTAQ KQPGRSSAEG DVDMDFDIKN