Gene YpsIP31758_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3524 
SymbollsrB 
ID5384780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp3978501 
End bp3979520 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content51% 
IMG OID640866539 
Productautoinducer AI-2 ABC transporter, periplasmic AI-2-binding protein 
Protein accessionYP_001402478 
Protein GI153948942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACAC AAAGATTAAA AAAATTAGCA CTGGTTTGCG CTCTTGGATT TGCCTGTATC 
ACTACCGCAC AAGCTGCGGA ACGCATCGCA TTTATCCCGA AACTGGTCGG GGTCGGTTTC 
TTCACCAGTG GCGGTAAAGG TGCCGTCGAT GCAGGTAAAG CATTGGGGGT GGATGTCACC 
TATGACGGCC CGACCGAACC GAGCGTTTCC GGCCAGGTCC AATTGATCAA TAACTTTGTT 
AATCAGGGCT ATAACGCCAT CGTGGTGTCT GCGGTATCAC CGGATGGCCT GTGCCCAGCC 
TTGAAGCGCG CCATGCAACG GGGCGTCAAA ATCCTAACCT GGGACTCCGA TACCAAACCA 
GAGTGTCGTT CGGTGTATAT CAACCAAGGT ACGCCAAATC AATTGGGATC AATGTTGGTG 
GATATGGCGG CTAATCAGGT GAAAAAAGAT CAAGCCAAAG TGGCGTTCTT CTATTCCAGC 
CCGACGGTGA CCGATCAGAA CCAGTGGGTC AATGAGGCGA AGAAAAAGAT TCAACAAGAG 
CACCCCGGCT GGGAAATCGT CACTACTCAG TTTGGTTATA ACGATGCCAC AAAATCCCTG 
CAAACCGCCG AGGGTATTTT AAAAGCCTAT GGCGATTTGG ATGCGATTAT TGCTCCGGAC 
GCTAACGCCC TGCCTGCGGC CGCACAAGCC GCCGAAAACC TGAAGCGCGC TAATGTTGCC 
ATCGTCGGCT TCAGTACCCC GAACGTGATG CGCCCCTATG TCGAGCGTGG CACGGTCAAA 
GAGTTCGGCC TCTGGGATGT GGTGAATCAA GGCAAAATCT CAGTGTATGT CGCCAATGAG 
ATGCTGAAAA AAGGCGATCT GAATGTAGGG GATAAGATTG ATATCCCGAA TATTGGTGTG 
GTTGAGGTCT CCCCTAACCG TGTGCAGGGC TACGACTATG AGGCGAAAGG CAACGGTATC 
GTTTTACTGC CACAGCGCGT CATCTTCACC AAAGAAAATA TCAGTAAATA CGACTTTTAA
 
Protein sequence
MRTQRLKKLA LVCALGFACI TTAQAAERIA FIPKLVGVGF FTSGGKGAVD AGKALGVDVT 
YDGPTEPSVS GQVQLINNFV NQGYNAIVVS AVSPDGLCPA LKRAMQRGVK ILTWDSDTKP 
ECRSVYINQG TPNQLGSMLV DMAANQVKKD QAKVAFFYSS PTVTDQNQWV NEAKKKIQQE 
HPGWEIVTTQ FGYNDATKSL QTAEGILKAY GDLDAIIAPD ANALPAAAQA AENLKRANVA 
IVGFSTPNVM RPYVERGTVK EFGLWDVVNQ GKISVYVANE MLKKGDLNVG DKIDIPNIGV 
VEVSPNRVQG YDYEAKGNGI VLLPQRVIFT KENISKYDF