| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3519 |
|---|
| Symbol | |
|---|
| ID | 5386910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3973503 |
|---|
| End bp | 3974423 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640866535 |
|---|
| Product | Crp/Fnr family sugar-binding transcriptional regulatory |
|---|
| Protein accession | YP_001402474 |
|---|
| Protein GI | 153949683 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG AGGAACTGCT CGCTCGCGTT GCGTGGTTTT ATTATCACGA TGGTTTAACA
CAAGGGGATA TTGGTGAGTT GCTGGGGCTG GCTCGGCTTA AAGTCTCCCG GTTATTGGAG
AAAGGCCGGC AGTCTGGGGT GATCCGCGTC CAGATTAATT CGCGCTATGA AGGCTGTCTG
GAACTGGAAA ATACCCTGCA ACAGCATTTT GGCCTGAAGC ATATCCGCAT TCTGCCGTCT
TTGGCCTCCC TCAGTATCAG TAGCCGGTTG GGTATTGGTG CCGCCCATTT ATTAATGGCG
CTGATACAAC CACAACAACT TTTGGCCGTT GGTTTCGGTG AGACCACCAT GTGCGCCTTG
CAACATTTGA GTGGTTTTAT CGCATCACAG CAGGTCCGTT TAGTCACGTT ATCCGGCGGT
GTCGGCTCCT ATATGACGGG GATTGGTCAG TTGGATGCGG CCTGCCAGGT CAGTATCATT
CCGGCCCCGC TGCGTGCCTC AAATGCCCAT GTTGCCGACA CGTTTCGCCA GGAAAACAGC
GTCCGAGATG TGATGCTAGC CGCCTGCGCG GCAGATATTG CGGTCGTTGG GATCGGTTCG
GTTAATCAGC AAAAAGAAGC CACAATTTTG CGTTCGGGCT ATATCAGCGA AGGTGAGCAA
CTGATGTTTA GCCGTAAAGG CGCGGTTGGG GATATCCTCG GTTACTTTAT CCAAGCCGAT
GGCGCGTTGG TGCCAGATAT GCAGATTCAT CAGGAGTTGA TTGGTATTTC GTTGGCTGAT
TTAACCACCA TCCCAACCGT GATTGGTGTT GCAGGGGGGG TAGAAAAAGC GGATGTGATT
GTCGCAGCGC TGCGGGGGAG GTATGTGAAT GCGTTGGTGA CGGATGAGGT GACGGCGCGT
GCAATCATTA ACTTACTTTA A
|
|---|
| Protein sequence | MSEEELLARV AWFYYHDGLT QGDIGELLGL ARLKVSRLLE KGRQSGVIRV QINSRYEGCL
ELENTLQQHF GLKHIRILPS LASLSISSRL GIGAAHLLMA LIQPQQLLAV GFGETTMCAL
QHLSGFIASQ QVRLVTLSGG VGSYMTGIGQ LDAACQVSII PAPLRASNAH VADTFRQENS
VRDVMLAACA ADIAVVGIGS VNQQKEATIL RSGYISEGEQ LMFSRKGAVG DILGYFIQAD
GALVPDMQIH QELIGISLAD LTTIPTVIGV AGGVEKADVI VAALRGRYVN ALVTDEVTAR
AIINLL
|
|---|
| |