| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3512 |
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| Symbol | |
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| ID | 5386441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3963688 |
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| End bp | 3966774 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640866528 |
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| Product | AcrB/AcrD/AcrF family transporter |
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| Protein accession | YP_001402467 |
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| Protein GI | 153949305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.270807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA CTGATAATTT TATCAATAAT AATACCCGTA TCTGGCTAAC GATTCTGTTG
CTAGGTATTG GTGGCATTAT TGCCTATCTC AATATAGGCA GGCTGGAAGA CCCGGCTTTT
ACCATCAAAA CCGCGGTCGT TGTCACCCGC TATGATGGCG CATCGGCACA ACAGGTTGAA
GAAGAAGTCA CGCTACCGTT GGAGAATGCC ATTCAGGAAC TCTCCTATGT GGATGACGTA
ACCTCCATTT CCAGTGCCGG TTTATCGCAG ATAACCATTA ATATTCGTGC GCAATACGGC
GCGAATGAGT TACCGCAAAT CTGGGATGAG CTGCGGCGTA AAATTAGCGA TAACAGTGTT
CGCCTACCAC CAGGGGCCAG TGCCCCCATG GTCAACGATG ATTTTGGCGA TGTTTACGGT
TTCTTCTTCT CACTGACCGG TGACGGCTAC AGTAATCAGG ATCTGCGTAA TTTTGCCGAG
CAATTGCGGC GTGAATTAGT GTTGGTGCCC GGTGTGGGTA AAGTCGGCAT CGTGGGTATT
TTACCGGAAG AAGTTCAGGT AGAAATTTCC CGTGCGCAGA TGACGGCCGC GGGTATTACA
CCGCAGCAGC TATCCGACTT GCTGAGTCGC CAAAACGTCG TGTCCGATGC AGGCCAGTTG
CAGGTGGGCA GTGAGTCGAT TCGCTTGCAC CCGACTGGCG AATTCCAAAG CGTACAAGAG
CTGGGGAATT TACTGGTCAG CCAACCCGGT AGCCCAAAAA GTGTCTATCT GCGCGATATT
GCCACGGTAA CCCAAGGCTT TGGTCATTCA CCGACCAATA TTTATCGCGC GAACGGTCAA
CCGGCATTGG CGTTAGGGAT CTCGTTTGCT CCCAATGTTA ACGTGGTAAA TGTTGGGAAT
GCGATTAAAT CCCGTCTGGC GCAGCTTGAA GGTGAGCGCC CGTCCGGGAT GCATATCAAT
GTGTTCTACG ATCAGTCTAA GGAAGTTGAA GGTGCGGTTA ACGGCTTCAT TCTTAACTTC
CTGCTGGCAC TGTTGATTGT TGTCGTTACC CTGCTGATCT TTATGGGGGT ACGCAGCGGC
GTGGTTATTG CCATCTCGCT GGCACTTAAC GTGCTCGGAA CGTTGCTCAT CATGTGGCTG
TTTAACATCG AGCTACAGCG GGTATCGTTA GGGGCGCTGA TCATTGCGCT GAGTATGCTG
GTGGATAACG CCATCGTGGT GGTGGAAGGG GTGGTCGTTG GGCGTCAGCG CGGCGATAGC
ATTTCTACTG CTATCGGTAA TGTGGTGAAA CGCTCGAAGA TGCCGTTGCT GGGTGCGACC
ATTATTGCCA TTTTGGCCTT TGCGCCTATC GGCCTGTCCA ATGATGCTAC CGGCGAATAT
TGTAAGTCGC TATTCCAGGT GTTGCTCATC TCGTTAATGT TGAGCTGGAT CACTGCGTTA
ACGTTAACGC CGGTGTTTGC CAAGTGGGCA TTCCAGAACC AAAAACAGCC TGAAGCTGAT
GCGGATAAGC CGGTTAAACA ACCGTATGAC GGCTGGTTAT TCCGCTATTA TCGGGTGGTG
TTGAATAAAT TACTGCAACA CCGCAGTATT ACATTAGTGC TCTTGGCCGC GTTATTAGTG
GCGTCGGTTA TCGGTTTTGG TCATGTTCGA CAGAGCTTCT TCCCGCCTTC TAACACACCA
ATCTTCTTTG TGGATATTTG GCTGCCTTAT GGTACGGATA TCAGCTATAC CGAAGATATT
GCAGCCAAAA TTGAACAGCA TATCAAGCAG CAAAAAAATG TAGCGGATAC CATGACAACC
ATAGGTCAGG GCGCAATGCG CTTTATGCTG ACCTACAATG GTCAACGTCA TTATCCTAAC
TATGCGCAGG TGATGGTCCG TACTGAGCAA CTGGAGCAAA TACCGGGCTT GATTGATGAA
ATCGAGTCAT ATATGCATGA CGAATATCCG CAGGTTGATG CGCAGATCAA ACGCATCATG
TTCGGGCCAT CAAACAACAG TTCTATTGAA GCCCGCTTTA TCGGCCCCGA TCCAGATGTG
CTACGCACCT TGGCAGCCCA GGCGGAACAG GCGATTATCG CTGACCCAAT GGCCGATGGT
GCAAGGCATG ACTGGCAGGA TCGTAGCAAG ATGATCCGGC CACAATTCTC CGATTATCTG
GGCCGCGAGT TGGGGGTCGA TAAACGCGAG GTGGATGGTA CGTTGCGCAT GAGTTTTGGT
GGCTTGCCGG TTGGGTTATA CCGCGATGGT ACCCGCCTGA TACCTATTGT CCTACGCACA
CCGGACTCTG AGCGGCTCAA TGCTGAGCGG TTGAACGATG TGATGGTCTG GAGCCAGGCG
CGCCAAGCCT TTATCCCGAT CGACAACGTG GTCACCAGTT TTGAAACCGA GTGGGAAGAT
CCACTGATTA TGCGTCTGGA TCGTAAGCGG ACACTGACGG TACAAACGGA TCCAACCCAT
CAGGGCGGTG AGACCTCTTC CGAGTTGTTG CAACGGATCA AGCCGGGCGT TGAAGCCATT
ACCTTGCCAC GGGGCTATGA ACTGGAGTGG GGCGGCGATT ACGAAAGTAC CAAAGAAGCA
CAGCGGGGTA TTTTCATTAG CTTGCCGATC GCGTTTCTGC TTATGTTTGT TGTGACCGTG
CTGATGTTTA GCTCGGTGCG TAATGCACTG GCTATTTGGC TGACGGTACC ACTGGCATTA
ATTGGTGTGA CCTTCGGCTT CCTACTGACG GGGATTCCGT TCGGCTTTAT GGCCTTGCTG
GGGTTATTAA GCCTGAGTGG GATGTTGATC CGTAACGGTA TTGTACTGGT CGAAGAGATT
GGTCTACAGC GGCAAGAGAA ACCGTTGCGT GAGGCGATTA TCGATGCTTC CACCGCGCGT
TTACGGCCGA TCATGCTGAC CGCATTTACC ACCGTGTTGG GGCTGGCTCC GCTGCTGAGC
GATGCCTTCT TCCAGAGTAT GGCGGTGGTG ATTATGTTTG GCTTGGGCTT CGCGACAGTA
CTGACATTGC TGGTACTGCC AGTGATTTAC AGCAGTATGA ATCCAGAGCC TAAAGAAAAG
ATCCACGATG AGCCAGTGAG TGAATAA
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| Protein sequence | MKLTDNFINN NTRIWLTILL LGIGGIIAYL NIGRLEDPAF TIKTAVVVTR YDGASAQQVE
EEVTLPLENA IQELSYVDDV TSISSAGLSQ ITINIRAQYG ANELPQIWDE LRRKISDNSV
RLPPGASAPM VNDDFGDVYG FFFSLTGDGY SNQDLRNFAE QLRRELVLVP GVGKVGIVGI
LPEEVQVEIS RAQMTAAGIT PQQLSDLLSR QNVVSDAGQL QVGSESIRLH PTGEFQSVQE
LGNLLVSQPG SPKSVYLRDI ATVTQGFGHS PTNIYRANGQ PALALGISFA PNVNVVNVGN
AIKSRLAQLE GERPSGMHIN VFYDQSKEVE GAVNGFILNF LLALLIVVVT LLIFMGVRSG
VVIAISLALN VLGTLLIMWL FNIELQRVSL GALIIALSML VDNAIVVVEG VVVGRQRGDS
ISTAIGNVVK RSKMPLLGAT IIAILAFAPI GLSNDATGEY CKSLFQVLLI SLMLSWITAL
TLTPVFAKWA FQNQKQPEAD ADKPVKQPYD GWLFRYYRVV LNKLLQHRSI TLVLLAALLV
ASVIGFGHVR QSFFPPSNTP IFFVDIWLPY GTDISYTEDI AAKIEQHIKQ QKNVADTMTT
IGQGAMRFML TYNGQRHYPN YAQVMVRTEQ LEQIPGLIDE IESYMHDEYP QVDAQIKRIM
FGPSNNSSIE ARFIGPDPDV LRTLAAQAEQ AIIADPMADG ARHDWQDRSK MIRPQFSDYL
GRELGVDKRE VDGTLRMSFG GLPVGLYRDG TRLIPIVLRT PDSERLNAER LNDVMVWSQA
RQAFIPIDNV VTSFETEWED PLIMRLDRKR TLTVQTDPTH QGGETSSELL QRIKPGVEAI
TLPRGYELEW GGDYESTKEA QRGIFISLPI AFLLMFVVTV LMFSSVRNAL AIWLTVPLAL
IGVTFGFLLT GIPFGFMALL GLLSLSGMLI RNGIVLVEEI GLQRQEKPLR EAIIDASTAR
LRPIMLTAFT TVLGLAPLLS DAFFQSMAVV IMFGLGFATV LTLLVLPVIY SSMNPEPKEK
IHDEPVSE
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