| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3509 |
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| Symbol | |
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| ID | 5387745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3959376 |
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| End bp | 3960530 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640866525 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001402464 |
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| Protein GI | 153950730 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.604082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGTG AATTGAATAT GAATAGCCAC TCCTACGATC AGCTTTTGAA AAGCAAGCAT
CGACTCTCTT TACTGCTTTT CCTATTTCTT AATGCATCAT CAGCTATTTT CAGTATGCTA
TCATCGTCGC CCAAGACACC CGCGGTAACG TTCCCTGTGG TGATGATTGC GGTTATAAGC
TTGAGCGCGG CGGCTTATCT AATTTTTATT TCAAAGAACG ACGCGGGCAG AAATAACTAT
GTTGATAAAA GTAACCATGT TGATAAAAAT AACTATGCGA ATAAATTGAA TTTATTTTCA
ATCCTCATCG GTCTACTTTG GGCATGGCAA ATCATTCTTA AATATGAATA TCTAGAGACT
AACGAAGATA ATTACTTATT ACTCAGTCTG TTTACGATCT TTTTTATCAG TACCATTGCT
TTGTCTGATA ATTTTCTCGC GTTTTGCCTG CATACGGCAC CTTCGGCAAT AACCGTCATC
TTACTGGATG ATTTTCATAA TATTTTCCGC ATTATATTTA CCATCATGTT ACCGCTGATT
GGTTTTTCTT TGCATCACTT GATGTTGCGT CGCACTGATA ATTTCACCCG TAAGCTGGTT
GATCACCTTT CCAACGAAAG AGAAAAATTC AGTGATTTAA GCATGATAGA CCCTCTGACC
AGTTTGTATA ATCGCCGTGG GCTGGAGAGC AAGCTTGAAA CGTTGTTATC TCAGTCGCCG
GGAAATCATT ATGTCCTGCT GCTCGATATC GATCACTTTA AAGCCTATAA CGACAACTAT
GGCCACACCA TGGGCGATCA GGCTCTGGTA CGGATTTCGG CGGCTATTCG CGATGCTGTG
CGTTCAAGAG ATATCGTGGT GCGTTATGGT GGTGAAGAGT TTCTCGTACT CCTAACACAT
GTCAGTGAAG AGTACGCCAG CCAATTGGCA GAGCGTGTAC GTCAGCGTGT TTTAGGCCTG
GATATTCCAC ATGTCTTTAA TCATAAGGTC TCTACGACGG TCACCTTAAG TGCGGGTATT
TCCCCCCTGC AAGCCTATGA CTTGGCCGCA TCATTGAAAG CCGCGGATGA AGCGCTTTAC
CGGGCCAAGA GAAATGGCCG CAATAACATC GAATTTGCTA AAGATGAATT ATCAAATGTA
CAGTCTTCCC CTTGA
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| Protein sequence | MQSELNMNSH SYDQLLKSKH RLSLLLFLFL NASSAIFSML SSSPKTPAVT FPVVMIAVIS
LSAAAYLIFI SKNDAGRNNY VDKSNHVDKN NYANKLNLFS ILIGLLWAWQ IILKYEYLET
NEDNYLLLSL FTIFFISTIA LSDNFLAFCL HTAPSAITVI LLDDFHNIFR IIFTIMLPLI
GFSLHHLMLR RTDNFTRKLV DHLSNEREKF SDLSMIDPLT SLYNRRGLES KLETLLSQSP
GNHYVLLLDI DHFKAYNDNY GHTMGDQALV RISAAIRDAV RSRDIVVRYG GEEFLVLLTH
VSEEYASQLA ERVRQRVLGL DIPHVFNHKV STTVTLSAGI SPLQAYDLAA SLKAADEALY
RAKRNGRNNI EFAKDELSNV QSSP
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