Gene YpsIP31758_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3498 
SymboldeoC1 
ID5385981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3947486 
End bp3948283 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID640866511 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001402453 
Protein GI153950774 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT TAACCGCCTG CGCGCATTTG AACGATTATG CTAAACGCGC GCTAAGTTTG 
ATGGATTTAA CCACCCTGAA TGACGACGAT ACCGATGAAA AAGTGATCGC GCTCTGTCAT
CAGGCTAAAA GCCCGGCCGG TAATACCGCG GCAATTTGTA TTTATCCTCG CTTTATCCCG
GTTGCCCGTA AGGCGTTACG TGAACAGGGC ACTCCTGAGA TCCGTATCGC AACGGTGACC
AACTTCCCTC ATGGCAATGA TGATGTTGCG ATTGCGTTGG CTGAAACCCG TGCTGCCATT
GCTTATGGTG CCGATGAAGT GGATGTGGTT TTCCCTTATC GCGCGTTAAT GGCCGGTAAC
GATAAAATTG GCTTCGAACT CGTGAAAACG TGTAAAGAAG CCTGCGCTGC GGCGAATGTA
TTACTGAAAG TCATCATTGA AACTGGCGAA CTTAAGCAAG CGCATTTAAT TCGTCAGGCC
TCTGAAATTG CAATCAAAGC GGGTGCCGAT TTTATTAAAA CCTCTACCGG TAAAGTGCCG
GTGAATGCCA CGTTGGAAAG TGCAGACATT ATGATCCGCA CTATCCGTGA GTTAGGCGTA
GGCGAAACGG TGGGCTTCAA ACCGGCTGGT GGTGTCCGTA CCGCAGAAGA TGCCGCGCAA
TTTTTGCAAT TGGCTGATCA ACTGATGGGG GAAGGCTGGG CTGATGCACG CCATTTCCGC
TTTGGCGCTT CCAGTCTACT CGCCAGTTTG CTGACCACAT TGGGTCACCA GAGTAACGCC
AACAGCAGCG GCTACTAA
 
Protein sequence
MTDLTACAHL NDYAKRALSL MDLTTLNDDD TDEKVIALCH QAKSPAGNTA AICIYPRFIP 
VARKALREQG TPEIRIATVT NFPHGNDDVA IALAETRAAI AYGADEVDVV FPYRALMAGN
DKIGFELVKT CKEACAAANV LLKVIIETGE LKQAHLIRQA SEIAIKAGAD FIKTSTGKVP
VNATLESADI MIRTIRELGV GETVGFKPAG GVRTAEDAAQ FLQLADQLMG EGWADARHFR
FGASSLLASL LTTLGHQSNA NSSGY