| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3497 |
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| Symbol | deoA |
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| ID | 5387753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3946043 |
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| End bp | 3947365 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640866510 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001402452 |
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| Protein GI | 153946986 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCTGG CACAAGAAAT TATCCGTAAA AAACGCGACG GTCAGCCATT GAGCGAAGAA
GAGATTCGTT TTTTTATCAA TGGGATCCGC GATAACGTTG TTTCTGAAGG GCAAATTGCC
GCTTTAGCGA TGACCATTTA TTTCCACGAT ATGAGTATGC CTGAGCGCGT TGCGCTGACC
ATGGCGATGC GTGATTCCGG TACTGTGCTG AATTGGAAGA GCCTGAATCT GAATGGCCCG
CTGGTCGATA AGCACTCCAC TGGTGGCGTG GGTGATGTGA CGTCACTGAT GCTTGGCCCG
ATGGTGGCAG CTTGCGGCGG CTATGTGCCG ATGATCTCTG GCCGTGGTCT TGGTCATACC
GGCGGCACAC TGGATAAACT GGAGGCGATC CCCGGTTTTG ATATTTTCCC GGATGATAAT
GCGTTCCGCA AAATTATTCA GAATGTTGGT GTGGCGATTA TCGGCCAAAC CAGCTCGCTG
GCCCCTGCCG ATAAGCGTTT TTACGCGACC CGCGATATTA CGGCAACAGT AGATTCTATT
CCATTGATTA CGGCCTCTAT CCTGGCCAAA AAATTGGCGG AAGGCCTGGA TGCATTGGTC
ATGGACGTGA AGGTCGGCTC TGGTGCCTTT ATGCCAACCT ACTCGTTGTC GGCTGATTTG
GCGCAGGCGA TTGTTGGTGT GGCAAACGGG GCGGGTTGCA AAACCACGGC GCTCCTGACG
GACATGAACC AAGTCCTGGC ATCCAGCGCC GGTAATGGGG TCGAAGTCCG CGAAGCTGTG
CGTTTCCTGA CGGGCGAATA TCGCAACCCA CGTTTGCTGG AAGTGACTAT GGCGCTGTGT
GTTGAAATGT TGCTGTCAGG CGGTTTAGCG CACGATGAAG CCGATGCCCG TGCCAAGCTG
CAAGCCGTTT TGGATAACGG CAAAGCGGCA GAAGTCTTTG GCCGCATGGT GGCCGCGCAA
AAAGGCCCGG TAGACTTTGT TGAACGCTAT GACAGCTACC TGCCCGTTGC TACCCTAAGC
AAACCGGTAT TTGCTGAACA GACGGGAATC ATTACTGCAA TGGATACCCG CGCCTTGGGT
ATGGCGGTGG TCGCCCTCGG CGGGGGACGC CGTCGGGCAA CGGATCCCAT TGATTATAGT
GTAGGGCTGA CGGAAATGGC CCGCTTGGGT ACCCGTGTTG ACGGGCAGCA GCCACTTGCG
GTGATCCATG CCAATAACGA AGATGACTGG CAACAGGCGG CAGAGGCTGT GCGTGCGGCC
ATCACCTTAG GGAATAACGC GCCAGAAGAA ACGCCAGTGA TTTATCGCCG TATCACTGAA
TAA
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| Protein sequence | MFLAQEIIRK KRDGQPLSEE EIRFFINGIR DNVVSEGQIA ALAMTIYFHD MSMPERVALT
MAMRDSGTVL NWKSLNLNGP LVDKHSTGGV GDVTSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLEAI PGFDIFPDDN AFRKIIQNVG VAIIGQTSSL APADKRFYAT RDITATVDSI
PLITASILAK KLAEGLDALV MDVKVGSGAF MPTYSLSADL AQAIVGVANG AGCKTTALLT
DMNQVLASSA GNGVEVREAV RFLTGEYRNP RLLEVTMALC VEMLLSGGLA HDEADARAKL
QAVLDNGKAA EVFGRMVAAQ KGPVDFVERY DSYLPVATLS KPVFAEQTGI ITAMDTRALG
MAVVALGGGR RRATDPIDYS VGLTEMARLG TRVDGQQPLA VIHANNEDDW QQAAEAVRAA
ITLGNNAPEE TPVIYRRITE
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