Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3496 |
Symbol | deoB |
ID | 5387918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3944688 |
End bp | 3945911 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640866509 |
Product | phosphopentomutase |
Protein accession | YP_001402451 |
Protein GI | 153947387 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1015] Phosphopentomutase |
TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTA CATTTATTAT GGTATTAGAT TCTTTTGGTA TTGGTGCTAG TGCAGATGCC AAAAAATTTG GTGACGAAGG CGCAGATACA TTAGGTCATA TCGCAGAAGC CTGTGCGCGT GGTGAAGCCA ACGTGGGCCG TAGCGGCCCG TTGACACTGC CTAACCTGAG CCGTTTAGGG CTGGGTAAAG CGGCAGAAGA ATCAACCGGT ACCTTCCCCG TTGGCTTGGA TAAGAACGCG GATATTATTG GTGCTTATGG CTACGCCAGC GAGCTGTCTT CTGGTAAAGA TACGCCGTCA GGTCACTGGG AAATTGCGGG TGTCCCCGTC TTGTTCGATT GGGGATATTT CAGCGATGTG GAAAACAGCT TTCCACAGGA ATTGCTGGAT AAACTGGTAA AACGCGCCAA TCTGCCGGGC TATTTGGGTA ACTGCCACTC TTCCGGTACG GTGATCCTTG ACCAACTGGG TGAGGAGCAT ATGAAAACCG GGAAGCCGAT TTTCTACACC TCTGCTGACT CCGTATTCCA GATTGCCTGC CACGAAGAGA CCTTTGGTCT GGATCGTTTG TATGAGCTGT GCGAAATTGC CCGTGAAGAG CTGACCGACG GTGGCTATAA CATTGGTCGT GTGATTGCAC GTCCGTTTAT CGGCGACAAA CCGGGTCACT TCCAACGCAC GGGTAATCGT CATGATCTGG CGGTTGAACC CCCTGCGCCG ACCATGCTGA AAAAACTGGT TGATGAGAAG GGCGGTGAAG TGGTGTCTAT CGGTAAAATT GCCGATATTT ATGCACAGGT TGGTATCACA CAGAAAGTGA AGGCCACGGG GCTGGATGCG TTGTTCGATG CCACGATAGA AGAGATGAAA AAAGCGGGCG ATAACACCAT CGTTTTCACT AACTTTGTTG ATTTTGACTC GTCTTACGGC CACCGCCGTG ATGTTGCTGG TTATGCCGCC GCGTTAGAAC TATTCGACCG CCGCCTACCG GAATTGATGG CACTGGTCAA AGAAGATGAC ATCCTGATCC TGACCGCTGA CCACGGTTGT GACCCAACCT GGCCGGGCAC TGACCATACC CGTGAGCACA TTCCGGTTTT GGTTTACGGC CCGAAAGTTA AACCGGGTTC ATTGGGGCAT CGTGAGACCT TTGCCGATAT CGGGCAGACA GTTGCGGCGT ATTTTGGGTT GTCGCCAATG GATTACGGCA AGAACATGCT TTAG
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Protein sequence | MKRTFIMVLD SFGIGASADA KKFGDEGADT LGHIAEACAR GEANVGRSGP LTLPNLSRLG LGKAAEESTG TFPVGLDKNA DIIGAYGYAS ELSSGKDTPS GHWEIAGVPV LFDWGYFSDV ENSFPQELLD KLVKRANLPG YLGNCHSSGT VILDQLGEEH MKTGKPIFYT SADSVFQIAC HEETFGLDRL YELCEIAREE LTDGGYNIGR VIARPFIGDK PGHFQRTGNR HDLAVEPPAP TMLKKLVDEK GGEVVSIGKI ADIYAQVGIT QKVKATGLDA LFDATIEEMK KAGDNTIVFT NFVDFDSSYG HRRDVAGYAA ALELFDRRLP ELMALVKEDD ILILTADHGC DPTWPGTDHT REHIPVLVYG PKVKPGSLGH RETFADIGQT VAAYFGLSPM DYGKNML
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