| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3495 |
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| Symbol | deoD |
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| ID | 5386507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3943844 |
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| End bp | 3944563 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866508 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_001402450 |
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| Protein GI | 153948351 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGC CACATATTAA TGCTGAAATG GGTGATTTCG CCGACGTTGT ATTGATGCCA
GGGGACCCAC TGCGGGCAAA GTTTATTGCA GAAACTTTCC TGCAAGACGT GCGTGAAGTG
AATAACGTAC GCGGCATGTT GGGTTTCACC GGCACCTATA AAGGCCGGAA GATTTCTGTG
ATGGGCCATG GCATGGGGAT CCCATCCTGT TCTATCTATG CTAAAGAGCT GATCACTGAT
TTTGGTGTGA AGAAAATCAT CCGCGTGGGC TCCTGTGGTG CCGTGCGCAC CGATGTTAAA
CTGCGTGATG TAGTGATCGG GATGGGGGCG TGCACGGATT CCAAAGTTAA CCGTATGCGT
TTTAAAGATC ACGACTATGC GGCGATTGCT GATTTTGAGA TGACCCGTAA TGCGGTTGAT
GCAGCCAAAG CGAAAGGGGT CAATGTCCGT GTCGGTAACC TCTTCTCCGC GGATCTTTTC
TACACGCCAG ACCCACAAAT GTTTGATGTG ATGGAAAAAT ACGGCATCTT GGGTGTAGAA
ATGGAAGCCG CCGGTATCTA CGGCGTAGCG GCAGAGTTTG GTGCGAAGGC ACTGACTATC
TGCACCGTTT CTGACCATAT CCGTACCGGC GAACAGACTA CCGCAGCTGA ACGTCAGACC
ACTTTTAATG ACATGATTGA GATCGCACTG GAATCTGTGT TACTGGGTGA TAACGCGTAA
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| Protein sequence | MATPHINAEM GDFADVVLMP GDPLRAKFIA ETFLQDVREV NNVRGMLGFT GTYKGRKISV
MGHGMGIPSC SIYAKELITD FGVKKIIRVG SCGAVRTDVK LRDVVIGMGA CTDSKVNRMR
FKDHDYAAIA DFEMTRNAVD AAKAKGVNVR VGNLFSADLF YTPDPQMFDV MEKYGILGVE
MEAAGIYGVA AEFGAKALTI CTVSDHIRTG EQTTAAERQT TFNDMIEIAL ESVLLGDNA
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