Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3494 |
Symbol | |
ID | 5385380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3943031 |
End bp | 3943732 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640866507 |
Product | hypothetical protein |
Protein accession | YP_001402449 |
Protein GI | 153948803 |
COG category | [R] General function prediction only |
COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGGG CTAAATTAAA ATTTCGACTA CACCGAACAG CAATTGTACT GATCTGTTTG GCATTATTGG TCTTACTGAT GCAAGGCGCA TCCTATTTCA GCCTGAGCCA CCAGTTAGCA CGTTCAGAGC AGGTCGAAGA GCTGGCACAA ACACTCGCCA AACAAGTTGC TTTTAACTTG TCGCCCATTA TGGATAGCGG TGACGACAAT ATTGATAGCC AGAAAGTCGA TGCCATTCTT CAACAACTGA CGCAATCCAG CCGTATTTTA GATGCCAGCG TCTATCAGAT TGACGGGACG TTGGTTGCCA GCGCCGGAGA AAATGTGAAG GTACGCGACC GGCTGGCACT GGATGGTAAA CGCCCTGGCA GTTATTTCAA CCACCAAATA GTTGAAATGA TCGCGGGTAA CAGTGGGCCA AGTGGTTTTC TGCGCATGAC ACTGGATACC CACGTGTTGG CGACGGAATC CAAGCAAGTG GATAACACCA CTAACTTACT GCGTCTGATG ATTCTGGTGG CTCTGGCCGT GGGGATTATT CTGGCCCGAA CCCTGTTACA AGGCCGCCGT AGCCGTTGGC AGCAATCCCC TTATCTGCTG ACGGCCAATA TACCGGTTAA AGAAGAAGAT GAAAGCGAAG ATGACACGCC AGAAGCCCTC GTCGGTCAGG CGGAAACCGA CCATAAGCCT GCCGATAAAT AG
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Protein sequence | MARAKLKFRL HRTAIVLICL ALLVLLMQGA SYFSLSHQLA RSEQVEELAQ TLAKQVAFNL SPIMDSGDDN IDSQKVDAIL QQLTQSSRIL DASVYQIDGT LVASAGENVK VRDRLALDGK RPGSYFNHQI VEMIAGNSGP SGFLRMTLDT HVLATESKQV DNTTNLLRLM ILVALAVGII LARTLLQGRR SRWQQSPYLL TANIPVKEED ESEDDTPEAL VGQAETDHKP ADK
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