Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3493 |
Symbol | serB |
ID | 5385834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3941817 |
End bp | 3942797 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866506 |
Product | phosphoserine phosphatase |
Protein accession | YP_001402448 |
Protein GI | 153950808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0560] Phosphoserine phosphatase |
TIGRFAM ID | [TIGR00338] phosphoserine phosphatase SerB [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTAATA GTCTGACCTA TTGCGATCTG CCTTCGGAGA TCTATCAATG GCCGGGTCTG CCACTTTCAC TCAGTGGCGA CGAAGTGATG CCGCTGGATT ATCGTGCCGG TCATACAGGT TGGCTGTTGT ATGGTAGAAA ACTGGATAAA CAGCGGATTA CCGATTTTCA ACGTCAGCTC GGTGCGGCCA TGGTGATTGT TTCTGCCTGG TGTGTGGAAG ATTATCAGGT GATCCGGCTA GCGGGTAGCC TAACACCACG AATTAAAACG CTGGCCGATG AGAGCGGCCT TGATGTCGCG CCATTGGGGG CGATACCGCA TCTACGGACT CCCGGCCTGC TGGTCATGGA TATGGATTCC ACCGCGATCC AAATCGAATG CATTGATGAA ATTGCCAAAC TGGCGGGTGT GGGCGATGAG GTGGCGGCGG TCACTGAACG CGCCATGCAA GGTGAGTTGG ATTTCTCGGC CAGTCTGCGC CAGCGGGTGG CGGCGCTGAA AGGAGCCGAT GCCAATATTT TGAAGCAAGT CCGTGACGAC TTGCCATTGA TGCCGGGGTT GGTCAGCCTG GTGCGTAAAC TTCAGGCGTT GGATTGGCAT GTGGCTATTG CTTCTGGCGG TTTTACCTAT TATGCCGAAT ACCTGCGTGA CAAATTGCGG TTGGTTCATG TTGCCGCGAA TGAGCTTGAA ATCAAAGACG GCAAACTGAC CGGGTGTGTA CTGGGGCCAA TTGTTGATGC GCAATATAAA GCAGATACCT TGATCAAACT GGCGGAGAAA TTGAATATCC CGCTAGCACA GACTATTGCT ATCGGCGATG GCGCTAATGA CCTGAAAATG ATGCAGGTTG CGGGTTTAGG TTTGGCTTTC CACGCCAAAC CGAAGGTTTA TGCCAAAGCG AAAGTGGCGA TCCGTCACGG TGATCTACTG AGTGTTCTCT GCATTTTGAC CGGCAGCTTA AAGCACGAGA GTGGCAAGTA G
|
Protein sequence | MSNSLTYCDL PSEIYQWPGL PLSLSGDEVM PLDYRAGHTG WLLYGRKLDK QRITDFQRQL GAAMVIVSAW CVEDYQVIRL AGSLTPRIKT LADESGLDVA PLGAIPHLRT PGLLVMDMDS TAIQIECIDE IAKLAGVGDE VAAVTERAMQ GELDFSASLR QRVAALKGAD ANILKQVRDD LPLMPGLVSL VRKLQALDWH VAIASGGFTY YAEYLRDKLR LVHVAANELE IKDGKLTGCV LGPIVDAQYK ADTLIKLAEK LNIPLAQTIA IGDGANDLKM MQVAGLGLAF HAKPKVYAKA KVAIRHGDLL SVLCILTGSL KHESGK
|
| |