| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3484 |
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| Symbol | |
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| ID | 5387525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3927605 |
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| End bp | 3929524 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866497 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001402439 |
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| Protein GI | 153947027 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAGT GGCGATATCT GGCGATTGGC GTGTGTCTGA TGGCGACTTC AGGAGTGACA
TTCGCCGATT CTCTTGATGC TCAGCGGCAG CGCTATCAGC AAGTTAAATT GGCTTGGGAC
AGCAATCAGA TGGATACCGT GGCACAACTG ATGCCAACGT TACGTGATTA TCCTTTGTAC
CCTTATTTGG AATACCGTCA GTTGACGCAA GATTTAAGCC AGGTGAGTAC GGCGCAAGTG
AAGGATTTTC TGAACCGTCA CCCCACATTA CCACCGGCGA AATCACTGCC ATCTCGTTTT
GTGAATGAAT TGGCTCGCCG CGAAGATTGG CGCGGGTTGT TAACGTTCAG CCCGACAGCG
CCTAAACCGG TTGCCGCCCG TTGTAACTAT TACTATGCCA AATGGGCCAC TGGTGAGCAG
TCTGTCGCTT GGGAAGGGGC CAGTGAAATC TGGCTCAATG GCCAGTCATT ACCGGGCAGT
TGCGATAAAT TATTCAGTGT CTGGCAACAA GCCGGGCACC AGACACCATT GGCAACACTG
GCGCGTATGA AGCTCGCGCT TAAAGAGGGT AACGCCAGCC TGGTGAGTTA CTTACTCAAA
CAACTGCCCG CAGATTACCA AACCATGGGC ACTGCACTGG CAAAATTGCA AAGTGATCCC
AGTAGTGTAG AAAGCTTTGC CCGCACCGTC GGGCCGACCG ATTTTACCCG TTCAGCGACA
ACAATTGCTT TCACCCGTTT GGCTCGACAG GATGTGGAAA ATGCGCGATT GATGATCCCA
TCATTAGTAC GGTTACAAAA AATGAGTGAC AGCGAGAAAC TTGAGCTGGA AGAGGCCGTC
GCCTGGCGTT TGATGGGTAA TGATGCGACT TACGAACAAG CTAAATGGCG GGATCAAGTT
GCGTTACGCA GCCACTCAAC CTCGCTACTG GAGCGTCGTA TCCGTATGTC ATTGGGCAGT
GGTGACCGGC AGGGGCTGGC AACCTGGCTG GCTCGTCTCC CGGCGGAGGC GCAAGATAAA
GATGAGTGGC GTTATTGGCG TGCATCGTTG TTGTTGGAAC AAGGAAAAAA AGCGGAAGGT
GAGGCAATAC TGCGTAGCCT GACGAAAGAA CGGGGTTTCT ATCCGATGGT GGCCGCCCAA
AAACTGAATA TTCCTTACCC GATTAAGGTT CAGGTGGCGG CCAAGCCAGA TGTGTCGCTG
GCGCAACGGC CTGAAATCGC CCGGGTTCGC GAGTTAATGT ATTGGAATAT GGATAACCAA
GCGCGCGCTG AATGGAGCTA TTTGGTGGCC AGTCGCAGTA AAGCTGAGCA AGAGGCTCTG
GCACGCTATG CCTTTGACCA GAAATGGGCT GATCTGAGTG TGCAAGCCAC TATTGTTGCC
AAGCTTTGGG ATCATCTGGA GGAGCGCTTC CCAATGGCAT GGACCAAAGA GTTCCGCCAG
TTTACGGAGG ATAAGGGGAT CACGCCGAGT TATGCGATGG CGATTGCACG TCAGGAAAGC
GCCTGGAATC CAAAAGCACA ATCACCGGTA GGCGCAACGG GATTAATGCA GGTGATGCCG
CGTACTGCAG AACATACCGT AAAACGGAAT AATATCGCTG GGTATCTGAA TAGCAGCCAA
CTCCTTGATC CGGTGACTAA CATTGAGATA GGAACCTACT ATCTGGAAGA GGTTTATCAG
CAATTCGGGC GTAACCGTAT TTTATCCAGT GCGGCTTATA ATGCAGGTCC GTCACGGGTG
AATACTTGGT TGGGTAACAG TGGTGGGCAG GTGGATGCGG TGGCTTTCAT TGAAAGTATT
CCATTCTCTG AAACGCGCGG CTACGTGAAG AATGTGTTGG CTTATGACGC TTTCTATCGT
CACTTTATGA ATCGCCCCGC AAAAGTGCTG AGTGACGCCG AGTGGCAGAG GCGTTATTGA
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| Protein sequence | MGKWRYLAIG VCLMATSGVT FADSLDAQRQ RYQQVKLAWD SNQMDTVAQL MPTLRDYPLY
PYLEYRQLTQ DLSQVSTAQV KDFLNRHPTL PPAKSLPSRF VNELARREDW RGLLTFSPTA
PKPVAARCNY YYAKWATGEQ SVAWEGASEI WLNGQSLPGS CDKLFSVWQQ AGHQTPLATL
ARMKLALKEG NASLVSYLLK QLPADYQTMG TALAKLQSDP SSVESFARTV GPTDFTRSAT
TIAFTRLARQ DVENARLMIP SLVRLQKMSD SEKLELEEAV AWRLMGNDAT YEQAKWRDQV
ALRSHSTSLL ERRIRMSLGS GDRQGLATWL ARLPAEAQDK DEWRYWRASL LLEQGKKAEG
EAILRSLTKE RGFYPMVAAQ KLNIPYPIKV QVAAKPDVSL AQRPEIARVR ELMYWNMDNQ
ARAEWSYLVA SRSKAEQEAL ARYAFDQKWA DLSVQATIVA KLWDHLEERF PMAWTKEFRQ
FTEDKGITPS YAMAIARQES AWNPKAQSPV GATGLMQVMP RTAEHTVKRN NIAGYLNSSQ
LLDPVTNIEI GTYYLEEVYQ QFGRNRILSS AAYNAGPSRV NTWLGNSGGQ VDAVAFIESI
PFSETRGYVK NVLAYDAFYR HFMNRPAKVL SDAEWQRRY
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