Gene YpsIP31758_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3472 
Symboltal 
ID5386788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3914369 
End bp3915322 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content48% 
IMG OID640866485 
Producttransaldolase B 
Protein accessionYP_001402427 
Protein GI153948659 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.179148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA AACTTACTTC CCTACGTCAA ATCACCACTG TAGTCGCCGA TACTGGGGAT 
ATTGCGGCGA TGAAATTGTA TCAGCCGCAA GATGCAACGA CTAACCCATC GATTATTCTG
AATGCTGCCC AAATCCCTGA ATACCGTAAA TTGATCGATG AAGCTATTGC CTGGGCGCGC
GAACAAAGCA GCGACCATGC TCAGCAGATC GTTGATGCGA CGGATAAACT GGCAGTAAAT
ATTGGTTTGG AAATTCTGAA ACTGATCCCA GGCCGTATTT CTACCGAAGT TGATGCTCGC
TTGTCCTATG ACACCGTCGC CAGCGTGGCA AAAGCCAAAC GTCTGATCAA ACTGTATAAC
GAAGCCGGTA TCAGCAATGA TCGTATTCTG ATCAAATTGG CCTCAACCTG GCAGGGCATC
CGCGCTGCGG AGCAGCTGGA AAAAGAAGGT ATCAACTGTA ACCTGACACT GTTGTTCTCC
TTCGCTCAGG CACGTGCTTG TGCTGAAGCG GGTGTGTTCC TTATTTCTCC TTTTGTTGGT
CGTATTCTTG ATTGGTACAA AGCCAATGGC GATCAAAAAG AGTTCGCACC AAGCGAAGAT
CCAGGTGTTG TTTCTGTCAC CGAGATTTAC CAGTACTACA AAAAACACGG TTATAAGACC
GTGGTGATGG GTGCAAGCTT CCGTAATTTG GGTGAAATCA TTGAGTTAGC TGGTTGTGAC
CGTTTGACTA TCGCCCCTTC ACTGCTGAAA GAGTTAGCAG AGAGCGAAGG CCCGGTAGAA
CGTAAACTGG CTTACACCGG TGAAATTCAG GCGAAGCCTG CTCCATTGAC TGAAGCGGAA
TTCTACTGGC AGCATAATCA GGATCCAATG GCGGTTGATA AACTGGCAGA CGGCATCCGC
AAGTTTGCTA TCGACCAAGG CAAACTTGAG AAAATGATCT CCGACTTGTT GTAA
 
Protein sequence
MTDKLTSLRQ ITTVVADTGD IAAMKLYQPQ DATTNPSIIL NAAQIPEYRK LIDEAIAWAR 
EQSSDHAQQI VDATDKLAVN IGLEILKLIP GRISTEVDAR LSYDTVASVA KAKRLIKLYN
EAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RILDWYKANG DQKEFAPSED PGVVSVTEIY QYYKKHGYKT VVMGASFRNL GEIIELAGCD
RLTIAPSLLK ELAESEGPVE RKLAYTGEIQ AKPAPLTEAE FYWQHNQDPM AVDKLADGIR
KFAIDQGKLE KMISDLL