Gene YpsIP31758_3465 details

Gene Information

• Locus tag: YpsIP31758_3465
• Symbol: dnaJ
• ID: 5384882
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3905025
• End bp: 3906164
• Gene Length: 1140 bp
• Protein Length: 379 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640866478
• Product: chaperone protein DnaJ
• Protein accession: YP_001402420
• Protein GI: 153950863
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000000000171425
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAAGA GAGATTATTA CGAGGTTTTA GGCGTCAGCA GGGACGCCGA AGAGCGTGAA 
ATCAAAAAAG CCTATAAACG CTTGGCAATG AAATTCCATC CGGATCGTAA ATCGGAGGAT 
AAAAACGCCG AAGAGAAGTT TAAAGAAGCC AAAGAAGCCT ATGAAATTCT GACCGACGCA 
CAAAAGCGTG CGGCATATGA TCAATACGGC CATGCAGCCT TTGAACAAGG TGGAATGGGA 
GGCGGCGGTT TCGGCGGCGG CGGCGGCGGT GCTGATTTTT CCGATATCTT CGGTGATGTT 
TTTGGTGACA TTTTTGGTGG TGGCCGGCGC CAGCAGCGTG CATCCCGTGG TTCAGATCTA 
CGTTACAATA TGGATCTGAC ACTGGAAGAA GCTGTGCGTG GTGTAACCAA AGAGATCCGA 
ATCCCAACGC TGGATGAATG TGATGTTTGC CACGGTAGCG GTGCTAAACC GGGGAGTTCA 
CCGGTCACTT GTCCAACTTG CCATGGGGCA GGTCAGGTAC AGATGCGCCA AGGGTTCTTT 
ACCGTACAAC AGGCATGTCC TCATTGTCAT GGCCGTGGTC AAATCATTAA AGACCCATGC 
AACAAGTGTC ATGGGCATGG TCGTGTTGAG AAATCTAAAA CGCTGTCGGT CAAAATTCCG 
GCGGGTGTTG ATACCGGTGA TCGCATTCGC TTAAGTGGTG AAGGCGAGGC GGGTGAGCAT 
GGCGCACCGT CAGGTGATTT GTACGTTCAG GTACAAGTCA AGGCGCATCC AATCTTCGAG 
CGTGAAGGCA ACAATCTGTA TTGTGAGGTT CCTATTAACT TTGCAATGGC GGCATTGGGC 
GGCGAAATCG AAGTTCCTAC ATTGGATGGG CGGGTTAAGT TGAAAATCCC TGCTGAAACC 
CAAACAGGTA AAATGTTCCG CATGCGCGGC AAAGGCGTTA AGTCTGTTCG TGGTGGTAGC 
CAAGGCGATT TGTTATGCCG TGTTGTGGTT GAAACACCGG TTAGCCTGAG CGAAAAACAA 
AAACAACTGC TGCGTGAGCT GGAAGAGAGC TTTGTCGGTG CTGCTGGTGA AAAAAATAGC 
CCGCGAGCTA AAAGCTTCTT AGATGGCGTT AAAAAATTCT TTGACGACTT GACACGCTAA 

 

Protein sequence

MAKRDYYEVL GVSRDAEERE IKKAYKRLAM KFHPDRKSED KNAEEKFKEA KEAYEILTDA 
QKRAAYDQYG HAAFEQGGMG GGGFGGGGGG ADFSDIFGDV FGDIFGGGRR QQRASRGSDL 
RYNMDLTLEE AVRGVTKEIR IPTLDECDVC HGSGAKPGSS PVTCPTCHGA GQVQMRQGFF 
TVQQACPHCH GRGQIIKDPC NKCHGHGRVE KSKTLSVKIP AGVDTGDRIR LSGEGEAGEH 
GAPSGDLYVQ VQVKAHPIFE REGNNLYCEV PINFAMAALG GEIEVPTLDG RVKLKIPAET 
QTGKMFRMRG KGVKSVRGGS QGDLLCRVVV ETPVSLSEKQ KQLLRELEES FVGAAGEKNS 
PRAKSFLDGV KKFFDDLTR