| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3460 |
|---|
| Symbol | ileS |
|---|
| ID | 5385325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3897974 |
|---|
| End bp | 3900790 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640866473 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001402415 |
|---|
| Protein GI | 153946992 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0011793 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACT ACAAGAATAC CCTGAACTTG CCTGAAACAG GGTTCCCGAT GCGCGGCGAT
CTGGCTAAGC GTGAACCTGA CATGCTGAAA CGTTGGTATG AGCAGGATTT ATACGGGATT
ATTCGTGCGG CCAAGAAAGG TAAAAAGACC TTTATTTTGC ACGATGGCCC CCCTTATGCG
AACGGCAACA TTCATATTGG TCACTCTGTT AACAAAATTC TCAAAGATAT TATTGTTAAA
TCAAAAGGAA TGGCTGGATA TGATTCACCG TATATCCCCG GTTGGGATTG TCATGGTTTG
CCTATCGAGC TAAAAGTTGA ACAATTAATT GGTAAGCCGG GTGAGAAAGT CAGCGCTGCA
GAGTTCCGGA CTGCTTGCCG TAAATATGCC GCTGAGCAGG TTGAAGGCCA GAAGAAAGAT
TTTATTCGCC TGGGCGTGTT GGGTGATTGG GACCATCCTT ACCTAACGAT GGATTTCAAA
ACTGAAGCCA ATATCATCCG CGCATTAAGC AAAATCATTG ATAACGGTCA TCTGCATAAA
GGTGCCAAAC CTGTTCATTG GTGTACTGAT TGCGGTTCGT CGCTGGCTGA AGCAGAAGTG
GAATATTACG ATAAGACGTC ACAATCTATT GATGTGCGTT TTAACGCGGT TGATACGGCA
ACTGTTGCGG CCAAATTTGG TGTGTCTGTC GTTAACGGCC CAATCTCACT GGTTATCTGG
ACTACCACGC CATGGACTCT GCCTGCTAAC CGGGCTATTT CACTGAATGC CGAATATCTT
TACCAGTTGG TTCAGGTTGA GGGCGAGTGC CTGATTCTGG CAGCCGATCT GGTTGAGAGC
GTCATGAAGC GCGCTGGCAT TACTCAGTGG GCCGTGTTGG GAAGTTGCAC AGGCTCAGAT
CTGGAACTGT TGCGCTTTAC CCATCCCTTT ATGGGCTTTG ATGTTCCAGC CATTTTAGGT
GAGCACGTTA CATTGGATGC CGGTACCGGT GCGGTTCACA CCGCGCCAGG TCACGGCCCT
GATGACTTTG TTATCGGCCA GAAATATGGC TTAGAAGTGG CGAACCCTGT GGGCCCAAAT
GGTTGCTATC TGGCGGGTAC GTATCCAACG CTGGACGGCC TGTTTGTGTT TAAAGCCAAC
GATGTGGTTG TCGAGTTGCT GCGTGAGAAA GGCGCACTGC TGCACGTTGA AAAACTGCTC
CACAGCTATC CATGCTGCTG GCGTCACAAA ACCCCTATTA TCTTCCGTGC AACGCCGCAG
TGGTTTATCA GCATGGATCA GAAGGGGTTG CGTAAGCAGT CACTTCAAGA GATCAAAGAC
GTGCAATGGA TCCCCGATTG GGGCCAGGCG CGTATCGAAA CCATGGTAGC AAACCGCCCA
GACTGGTGTA TCTCTCGTCA GCGTACTTGG GGGGTGCCGA TGTCTCTGTT CGTTCACAAA
GAGACCGAAC AACTTCATCC GCGCAGTATT GAACTGATGG AAGAAGTGGC CAAACGTGTT
GAGCAAGATG GCATTCAGGC GTGGTGGGAT CTGGATCCGG CAGAGATTTT AGGTGCCGAT
GCCGCAGATT ATGTCAAAGT GCCAGATACG CTGGACGTAT GGTTTGACTC TGGCTCCACC
CATTCTTCGG TCGTTGACGC CCGCCCTGAA TTTGGTGGCC ATAGCCCGGA TATGTATCTG
GAAGGCTCTG ACCAGCACCG CGGCTGGTTT ATGTCTTCAT TGATGATTGC TACTGCGATG
AAAGGCAAAG CGCCTTACCG TCAGGTTCTG ACCCACGGCT TTACTGTGGA TGGTCAGGGT
CGCAAAATGT CCAAATCCAT TGGTAACACC ATCAGCCCAC AAGATGTCAT GAATAAGCTG
GGGGGTGACA TTCTGCGCCT ATGGGTGGCA TCAACCGACT ATACCGGTGA GATTGCTGTT
TCTGATGAAA TTCTGAAACG CTCTGCGGAC TCCTATCGTC GTATCCGTAA TACCGCACGC
TTCCTATTAG CTAACCTGAA CGGCTTTGAT CCCGCACAGC ATCAAGTGAA ACCGGAAGAG
ATGGTTGTAG TCGATCGCTG GGCGGTTGGC CGTGCGCAAG CGGCTCAGGC AGAAATTATG
GAAGCGTATG AGAATTACGA TTTCCATTTG GTAGTACAAC GGCTGATGCA GTTCTGCTCG
GTTGAGATGG GGTCCTTCTA TCTGGATATC ATTAAAGACC GTCAGTACAC CGCGAAAGGT
GACGGCATTG CACGCCGTAG CTGCCAGACA GCACTGTTCC ATATTGCCGA GGCGTTGGTG
CGCTGGATGG CCCCAATCAT GTCCTTCACT GCGGATGAAA TCTGGAATCA TCTGCCGGGC
GAGCGCCAAC AATATGTCTT CACTGAAGAA TGGTATGACG GTCTGTTTGG TTTGGCGGGC
AACGAAAGTA TGAATGATAC TTTCTGGGCT GAATTGTTGA AAGTGCGCGG CGAAGTGAAC
AAAGTGTTGG AGCAGGCCCG TAGCGATAAA CGTATTGGTG GCTCATTAGA GGCCGCAGTG
ACGTTATACG CAGAGCCTGA ACTGGCTGCT CGTTTGAATA GTTTGCAAGA TGAATTGCGC
TTTGTTCTAC TGACTTCTGC CGCTAAAGTG GCCGCTTATG CTGATGCGGG CAATGATGCT
CAGCAAAGTG AATTAATTGC CGGATTGAAA ATTACCTTTA ATAAGGCTGA CGGCGAGAAG
TGCCCACGTT GCTGGCATTA CACGCAAGAT GTCGGTTTGG TAGCAGAGCA CGCTGAACTG
TGTGGTCGCT GTGTCACTAA CGTTGCTGGT GATGGTGAGG AGCGTAAGTT CGCCTGA
|
|---|
| Protein sequence | MSDYKNTLNL PETGFPMRGD LAKREPDMLK RWYEQDLYGI IRAAKKGKKT FILHDGPPYA
NGNIHIGHSV NKILKDIIVK SKGMAGYDSP YIPGWDCHGL PIELKVEQLI GKPGEKVSAA
EFRTACRKYA AEQVEGQKKD FIRLGVLGDW DHPYLTMDFK TEANIIRALS KIIDNGHLHK
GAKPVHWCTD CGSSLAEAEV EYYDKTSQSI DVRFNAVDTA TVAAKFGVSV VNGPISLVIW
TTTPWTLPAN RAISLNAEYL YQLVQVEGEC LILAADLVES VMKRAGITQW AVLGSCTGSD
LELLRFTHPF MGFDVPAILG EHVTLDAGTG AVHTAPGHGP DDFVIGQKYG LEVANPVGPN
GCYLAGTYPT LDGLFVFKAN DVVVELLREK GALLHVEKLL HSYPCCWRHK TPIIFRATPQ
WFISMDQKGL RKQSLQEIKD VQWIPDWGQA RIETMVANRP DWCISRQRTW GVPMSLFVHK
ETEQLHPRSI ELMEEVAKRV EQDGIQAWWD LDPAEILGAD AADYVKVPDT LDVWFDSGST
HSSVVDARPE FGGHSPDMYL EGSDQHRGWF MSSLMIATAM KGKAPYRQVL THGFTVDGQG
RKMSKSIGNT ISPQDVMNKL GGDILRLWVA STDYTGEIAV SDEILKRSAD SYRRIRNTAR
FLLANLNGFD PAQHQVKPEE MVVVDRWAVG RAQAAQAEIM EAYENYDFHL VVQRLMQFCS
VEMGSFYLDI IKDRQYTAKG DGIARRSCQT ALFHIAEALV RWMAPIMSFT ADEIWNHLPG
ERQQYVFTEE WYDGLFGLAG NESMNDTFWA ELLKVRGEVN KVLEQARSDK RIGGSLEAAV
TLYAEPELAA RLNSLQDELR FVLLTSAAKV AAYADAGNDA QQSELIAGLK ITFNKADGEK
CPRCWHYTQD VGLVAEHAEL CGRCVTNVAG DGEERKFA
|
|---|
| |