Gene YpsIP31758_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3459 
SymbollspA 
ID5387317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp3897465 
End bp3897974 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID640866472 
Productlipoprotein signal peptidase 
Protein accessionYP_001402414 
Protein GI153947776 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0475821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC CTATTTGCTC GACCGGATTG CGCTGGTTAT GGCTGGCAGT TGTCGTTGTC 
ATCTTGGATA TCAGCAGCAA GCAGTGGGTC ATGGCCCACT TTGCTCTGTA TGAATCGGTG 
CCACTGATTC CTTTTTTCAA CCTAACCTAT GCGCAGAATT TTGGCGCAGC ATTTAGCTTC 
TTGGCGGATA AAAGTGGTTG GCAGCGTTGG TTCTTTGCCG GTATTGCGAT AGGCATCTCC 
GTCGTATTAA TGGTGATGAT GTATCGCTCA ACAGCAAAGC AACGCCTGAT AAATTGTGCT 
TATGCATTAA TTATCGGTGG TGCACTCGGG AATTTATATG ACCGTTTAGT GCATGGCGCA 
GTCAACGATT TTCTCGATTT TTACATCAAT AACTGGCATT TCCCGACGTT CAATTTGGCC 
GATGTGGCGA TATCCATTGG TGCTGTATTG GTTATCTTTG AAGGCTTCTT AAGTCCGGCA 
GAAAAAAACG CGGTGAATAA AAATGAGTGA
 
Protein sequence
MNKPICSTGL RWLWLAVVVV ILDISSKQWV MAHFALYESV PLIPFFNLTY AQNFGAAFSF 
LADKSGWQRW FFAGIAIGIS VVLMVMMYRS TAKQRLINCA YALIIGGALG NLYDRLVHGA 
VNDFLDFYIN NWHFPTFNLA DVAISIGAVL VIFEGFLSPA EKNAVNKNE