Gene YpsIP31758_3443 details

Gene Information

• Locus tag: YpsIP31758_3443
• Symbol: pdxA
• ID: 5385123
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3882197
• End bp: 3883192
• Gene Length: 996 bp
• Protein Length: 331 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640866456
• Product: 4-hydroxythreonine-4-phosphate dehydrogenase
• Protein accession: YP_001402398
• Protein GI: 153949539
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1995] Pyridoxal phosphate biosynthesis protein
• TIGRFAM ID: [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.00669641
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAACC ACAATAATCG TCTAGTGATC ACCCCCGGCG AGCCAGCCGG GGTCGGGCCG 
GATTTAGCCA TCGCTCTGGC TCAACAGGAT TGGCCTGTTG AGCTGGTAGT CTGCGCGGAT 
CCGGCCTTGC TACTGGCCCG AGCCAGCCAA CTTAATCTGC CCCTGCAATT GCGTGAGTAC 
CAAGCTGACC AGCCGGCAAT AGCACAGCAA GCAGGGTCAC TGACTATTTT ACCTGTAAAA 
ACAGCCGTTA ATGTTGTCCC TGGCAAGCTT GATGTCGGTA ACAGTCACTA TGTGGTTGAA 
ACGTTAGCCA AGGCTTGTGA TGGTGCAATC AGTGGTGAAT TCGCTGCATT GGTCACGGGC 
CCGGTACAAA AAAGTATTAT CAATGATGCC GGCATCCCCT TCATTGGGCA TACCGAATTC 
TTTGCTGACC GCAGCCACTG CCAGAGGGTG GTGATGATGC TGGCAACGGA AGAGTTGCGT 
GTGGCTTTAG CGACCACCCA CTTGCCATTA TTGGCGGTGC CAGGTGCCAT TACGCAAGCC 
AGCTTACATG AAGTGATCAC CATCCTTGAT AACGACCTAA AAACCAAGTT TGGCATTACT 
CAGCCACAAA TTTATGTTTG TGGGCTTAAT CCTCATGCTG GCGAAGGGGG ACATATGGGC 
CATGAAGAGA TCGATACGAT TATTCCTGCC CTGAATACAC TACGCCAGCA AGGGATAAAC 
CTCATTGGCC CACTACCAGC AGACACCCTG TTTCAGCCGA AATATCTGCA ACATGCAGAT 
GCCGTTCTCG CGATGTATCA CGATCAGGGG CTGCCAGTAT TGAAATATCA AGGGTTTGGC 
CGAGCAGTCA ATATCACTCT CGGTTTGCCT TTTATCCGCA CTTCTGTGGA TCACGGTACC 
GCTTTAGAAC TCGCCGCAAC CGGTACTGCC GATGTTGGCA GTTTCATTAC GGCATTAAAC 
TTAGCCATCA AAATGATAAA TAACAGCAAT GAATAA 

 

Protein sequence

MHNHNNRLVI TPGEPAGVGP DLAIALAQQD WPVELVVCAD PALLLARASQ LNLPLQLREY 
QADQPAIAQQ AGSLTILPVK TAVNVVPGKL DVGNSHYVVE TLAKACDGAI SGEFAALVTG 
PVQKSIINDA GIPFIGHTEF FADRSHCQRV VMMLATEELR VALATTHLPL LAVPGAITQA 
SLHEVITILD NDLKTKFGIT QPQIYVCGLN PHAGEGGHMG HEEIDTIIPA LNTLRQQGIN 
LIGPLPADTL FQPKYLQHAD AVLAMYHDQG LPVLKYQGFG RAVNITLGLP FIRTSVDHGT 
ALELAATGTA DVGSFITALN LAIKMINNSN E