Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3438 |
Symbol | |
ID | 5385284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3874578 |
End bp | 3875321 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640866451 |
Product | hypothetical protein |
Protein accession | YP_001402393 |
Protein GI | 153946848 |
COG category | [S] Function unknown |
COG ID | [COG5419] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000158666 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA AGCTATATAA TGACTTCGCG TGGGAATGCC TGAGGCGAAA TCCACAATAT ATTAGCGATT GGGAATTATT TATGAAAAAT ACTCTTACTA ATGGAGGGGG TATACCCGAT GACTCTGAAT TAATCCAATC AGAGCTGGAT TTGAATGCAG AAAAAAAATG GGGAGTAATG AAATATATTG ATCCTTATAA CTCTGACCCA ACAAATGTTT TTTGGTCACT AAAATTAAGT AACCGTTCAG TTAGAGTTAA ACTCAGTAAT ACTGGAAATG TCAAAGGGGG ATATACATGG GGAGATATGT CCAACCTACC AGGAGTCAAA CATCAACGCC TTCTTATGCA TGACAATACA CTGTGCGTAA AAATATTTAG TCAGAATGGG TATTTTCAGC TTTTTATCGA GAGTGCAGAT GCATTAAAAG ATGATTCAAA CCTCTATATT TATATCCCTT TGAACCTTGA ATCTGATGTT TTTGCTAAAA ATATTGAGTT ATTACAGAGC ATTGTTAATC ACAAAATAGA GGTGGAATGC AAAGAGGAGC AATATTTAGG TCTCTTGAAG ACCATAGATG ACAGAAAACA AGGCTTCTCC CACCGGGATA TCGCTTCAGA AATTTTTGGT AAGGAACTGG TAAAAAATGA ATGGTCTGCT GACAGTTGGG TCAGAGCAAA AATCCGCTAT CGTATAAAGA AGGCGAATGC ACTTATTAAT TACGGCTACC TGAACTTCCT CTAG
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Protein sequence | MRKKLYNDFA WECLRRNPQY ISDWELFMKN TLTNGGGIPD DSELIQSELD LNAEKKWGVM KYIDPYNSDP TNVFWSLKLS NRSVRVKLSN TGNVKGGYTW GDMSNLPGVK HQRLLMHDNT LCVKIFSQNG YFQLFIESAD ALKDDSNLYI YIPLNLESDV FAKNIELLQS IVNHKIEVEC KEEQYLGLLK TIDDRKQGFS HRDIASEIFG KELVKNEWSA DSWVRAKIRY RIKKANALIN YGYLNFL
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