Gene YpsIP31758_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3438 
Symbol 
ID5385284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3874578 
End bp3875321 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content37% 
IMG OID640866451 
Producthypothetical protein 
Protein accessionYP_001402393 
Protein GI153946848 
COG category[S] Function unknown 
COG ID[COG5419] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000158666 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA AGCTATATAA TGACTTCGCG TGGGAATGCC TGAGGCGAAA TCCACAATAT 
ATTAGCGATT GGGAATTATT TATGAAAAAT ACTCTTACTA ATGGAGGGGG TATACCCGAT
GACTCTGAAT TAATCCAATC AGAGCTGGAT TTGAATGCAG AAAAAAAATG GGGAGTAATG
AAATATATTG ATCCTTATAA CTCTGACCCA ACAAATGTTT TTTGGTCACT AAAATTAAGT
AACCGTTCAG TTAGAGTTAA ACTCAGTAAT ACTGGAAATG TCAAAGGGGG ATATACATGG
GGAGATATGT CCAACCTACC AGGAGTCAAA CATCAACGCC TTCTTATGCA TGACAATACA
CTGTGCGTAA AAATATTTAG TCAGAATGGG TATTTTCAGC TTTTTATCGA GAGTGCAGAT
GCATTAAAAG ATGATTCAAA CCTCTATATT TATATCCCTT TGAACCTTGA ATCTGATGTT
TTTGCTAAAA ATATTGAGTT ATTACAGAGC ATTGTTAATC ACAAAATAGA GGTGGAATGC
AAAGAGGAGC AATATTTAGG TCTCTTGAAG ACCATAGATG ACAGAAAACA AGGCTTCTCC
CACCGGGATA TCGCTTCAGA AATTTTTGGT AAGGAACTGG TAAAAAATGA ATGGTCTGCT
GACAGTTGGG TCAGAGCAAA AATCCGCTAT CGTATAAAGA AGGCGAATGC ACTTATTAAT
TACGGCTACC TGAACTTCCT CTAG
 
Protein sequence
MRKKLYNDFA WECLRRNPQY ISDWELFMKN TLTNGGGIPD DSELIQSELD LNAEKKWGVM 
KYIDPYNSDP TNVFWSLKLS NRSVRVKLSN TGNVKGGYTW GDMSNLPGVK HQRLLMHDNT
LCVKIFSQNG YFQLFIESAD ALKDDSNLYI YIPLNLESDV FAKNIELLQS IVNHKIEVEC
KEEQYLGLLK TIDDRKQGFS HRDIASEIFG KELVKNEWSA DSWVRAKIRY RIKKANALIN
YGYLNFL