| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3432 |
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| Symbol | |
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| ID | 5385236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3868078 |
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| End bp | 3869922 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866445 |
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| Product | hypothetical protein |
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| Protein accession | YP_001402387 |
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| Protein GI | 153948697 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACG AAAGTTTTCT GGCTCTATAC AACGAAGAGT TGCGTTATCT GCGTGAAGAT
GGGCAGCGCT TCGCTCATAT GCATCCGCAA GTCGCCCAAC ACCTTGGGTT ACATGCTGAT
GGTGTGCTCG ATCCTTTCGT CGAACGGCTC CTTGAAGGCA CCGCTTTCTT GAGTTCCCGT
ATCCAACAGC GTTTGAACAA CGAGCATCCA GAGTTTGCTT TGCAAATGCT TGGGCGTTTG
GCCCCACTTT GGTATACACC CCTGCCGTCG ATTGCCACCA TTGCCATGGT TCCGGATCTT
ACGTCACCGC AATGGCACTC GCGCGTCGTA TTGCCTAAAG GTAGCCGCGT GACATTGAGT
GACAGTTCGC TGAACAACCG GTTGGCGAAT TTCTCTACTG GCCGCACGCT GAAAATACAG
CCATTGGTCA TTGAAAATGC CGAGTGTGCC AGCACGCCAC CGGCGTATTT ACCGCTCTCT
GTGGCTTCAC AATTACAAGC TGGTCAGGCC CATCTGCGCT TGCGTCTGAC CACTCAAGGT
GTCGCGTCTT TATCTGAGCT GGATTTCGCC CCGATGAACC TGACGCTGGC GGGGGGAATA
ATTCAGTCAA ATCAGTTAAT CACGACACTG TTGAATAACA CCTTACATAT TGTTTTGTGG
GCCAACACGG ATGGGAAACC GCTGGTCAAA GTTCTTACCA AAGAACATCT TCGCCAGGGA
GGGCTGGATG AACAAGAGGC GCTTTTACCT GTTGCGATCA GCGAAATGCC TGGAAACCGT
TTGCTACGAG AATATTTTGC TGCTCCTTCG CGTTTTTTCG ATCTGGAACT GCATGGCCTC
AACGACTTCC TGCAACAAGG GGACGGCATT CATACCTTTG AGGTGCTGTT TGTACTGGAT
CAGCGCCCCC TACATTTGAT TGATAGGGTC ACTGGCAATG ACTTCCGACT CTTCGCCACA
CCTATTATTA ACCTGTTCAA ACGCCGTTGT AGCCCGGTGC TGATTAATGG TGAACACACC
GAATATCCCG TCATTGTTGA CCCCCTGAAC CCCCGCTTGT ACGAAGTCCA TCATGTACTC
GGGGTCAACG GTTTGTTGAG CGAAGGGGGG AGCGTGCAGT TTTCTTCCCT TCATGGTCAT
GCCCGTTTTG ATGATGACGA TAAAGTGGCG GGTTACAGCA TTCGCCGTCG CCGCGACTTC
ACGGATAAAA ATCATCAGAA AAATTCACCT TTACCTCATG ACAGCTTATT CATTGCCCTT
TCACCGGGGA CCAGCGGGAT AGATATTGAT CACGTCAAGT CGCTGTCGAT TGAAGCCATG
GTGTGCGAAC GCCACTTAAT TCCCAGCCAA TTACAGCATC CGGAATTCAA GCTGGAAATT
GCCCTGCCAG TGGGGCAGAT CGAAATGCTG CGTCACCCGG CAAAACCACA GGGTGTGCCG
AATATTGATC AAGCCTGGCG GGCGTTACAA CTGATTGCCA ACAATCCGCT GCGTTATGCG
CTGCCGGATG TCACCGATTG TTCGCCACTG CTAAAAGATT GGCTGTCGAT ATTTTGTCAG
CATGAAGAGG CGAGCCAGCA TAAGAGGATC ACTAGCCTGA CTCACGCCAG TGTGGCGCAT
AATTTTGAAC GTCATACCGC TCCGGGGCCG ATCGCCTGGA GCCGGGGGGT TGAAGCCACA
CTGGATTTCA ACAGCAGCCA CCACAGTGAT AAAGGTGCAT TCCTCTTTGC GCGGATCCTG
CATCACGCGC TGTCAGAATA TTGTGAATTA GGGCAGACCC TGAGGTTACA CATGCAGGTT
GATGGTGAAA CCTTCGCCAA ATGGGGGCCT GTCAACTATG GCTAG
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| Protein sequence | MPNESFLALY NEELRYLRED GQRFAHMHPQ VAQHLGLHAD GVLDPFVERL LEGTAFLSSR
IQQRLNNEHP EFALQMLGRL APLWYTPLPS IATIAMVPDL TSPQWHSRVV LPKGSRVTLS
DSSLNNRLAN FSTGRTLKIQ PLVIENAECA STPPAYLPLS VASQLQAGQA HLRLRLTTQG
VASLSELDFA PMNLTLAGGI IQSNQLITTL LNNTLHIVLW ANTDGKPLVK VLTKEHLRQG
GLDEQEALLP VAISEMPGNR LLREYFAAPS RFFDLELHGL NDFLQQGDGI HTFEVLFVLD
QRPLHLIDRV TGNDFRLFAT PIINLFKRRC SPVLINGEHT EYPVIVDPLN PRLYEVHHVL
GVNGLLSEGG SVQFSSLHGH ARFDDDDKVA GYSIRRRRDF TDKNHQKNSP LPHDSLFIAL
SPGTSGIDID HVKSLSIEAM VCERHLIPSQ LQHPEFKLEI ALPVGQIEML RHPAKPQGVP
NIDQAWRALQ LIANNPLRYA LPDVTDCSPL LKDWLSIFCQ HEEASQHKRI TSLTHASVAH
NFERHTAPGP IAWSRGVEAT LDFNSSHHSD KGAFLFARIL HHALSEYCEL GQTLRLHMQV
DGETFAKWGP VNYG
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