| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3429 |
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| Symbol | |
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| ID | 5385842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3862044 |
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| End bp | 3864392 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866442 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001402384 |
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| Protein GI | 153947514 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAA TTGAGATAGA GAATGAGGTT TTATCGGGCC AGGATGCTTT TCCTCTCTCC
TTCAAGACGC AGGAAAAAGT GTCAGGGAAT CCATCCTACC AACTGGTATT TCAGGTAGCA
GAAGCGGACC TCGATCTGGT CAGTTTGCTG GGGGAAATCA TCAAAGTCAG GATTGAGTTA
CCTGACTCAG CCGGCTACCG GACCTTTTTT ACCTATGTGA TCGCCGGTGC TGATGAAGGG
CAACGGCAAG ACAAATTTGT TTACAGCCTG GAACTGAGTA CCTGGACGTG GTTTTTGATG
CAAAACCGCA ACTGCCGGAT ATTTCAGGAC CTGAATATTA TCGATATTAT CGAACAGGTA
TTTTCCAAAT ATAACTTTGC GGATTACCGT TTTGATATTG TCGGTAACTA TCGGTTACGC
GAGTACTGCG TACAGTTTGC AGAAACCGAT TTCGACTTTG TTAATCGTCT GATGGAAGAC
GAAGGCGTTT GGTATTACTT CGAACATAAC GAAGATAAGC ACACGCTGGT CATGACAGAT
CAGCAACAAT TCCCTGTATT GGAAGGGCAT TATGCAGAAC TGAGTTTCCT GCCTGACAGT
GAAGAGATGC GCGCCATCCG TGAGGGGATA CAGCGTATTC AACGCTCACA ACGCATCCAC
TCCAGCGAAA TTGTCTTACG TGACTTCGAT TTCCTTAATC CACGCAATAC ATTACAAACC
CATATCGAAG AAAGCCGCCA ACACCTGCAA GGCGTACCAC TGGAATGGTA TGACTACGCG
GCGGGTTACA CCGATCCCCA GCATGGTGAG AGCATCGCCC GTTTACGCCT TGAAGCTATA
CAGAGTAATG GGCAGCTCTT GTCTGGTGAA AGTAATGCCA CAGGATTAGT GCCAGGGCGC
TCTTTTGCTC TGGTACAGCA CCCTGATAAC AACCGTAATC GGGGATTCAA ACTGATCAGT
TGTGACTACA GTTTTGTCCA GGATGGGCCG GACAGTGCGA GCCAGGGACG TAATGTCGCC
TGTAAGTTTA AGGCATTGAA TGATGACGTC GTTTATCGTC CACAATGTGT CACGCCACCG
CCAAAGGTCC CTGGTGTGCA AAGTGCCACA GTGGTCGGTG CGCGTGAATC AGAAGTGCAT
ACCGATAAGT TCGCCCGTAT TCGCGTTCAC TTTCACTGGG ATCGTTATAA AACCACCGAA
GATGATAGCT CCTGCTGGAT CCGCGTTGTA CAGGCGTGGG CCGGTAAAGG CTGGGGCGTC
CTGGCGATGC CTCGGGTCGG GCAAGAAGTG CTGGTCAATT ACGTTGACGG CGATCTTGAT
CGCCCGATGG TGACCGGGAT CGTCTACAAC GGTGAGAACC CACCGCCTTA CCGTTTACCT
GACCACATTA ACTACTCCGG TTTTGTCTCA CGCTCACTGC GCTTTGGTCA GCCACAACAC
GCCAGCCAGC TTACCTTCGA TGATAATCGG GGCAATGAGC GGATCATGCT ACATGCTGAG
CGCGACTTAC AAAGAACGGT TGAACGTAAC AGTGCGACGG CCGTCGGTCA GGATAAATAC
GACACGGTGG AACGGACGGC CACGGAGTGG ATCAACAACC ATATCTCCTA CAAAGACTTC
AGTTTCTCGG TGACTGGCAT GAGTGTCTCC GCGACGGGCA TCAGTGTCTC GACAACGGGA
ACGAGCTTAT CTGTCACCGG CATGAGCACC AGCGTTACGG GTGTCAGTGT CGGTTTCACC
TTGATAGGGA CCTCTTTTAC TGGCGTGAGC GCGTCGTTTA CTGGTGTCAG TACCTCTTTC
ACCGGGGCCA GCAACTCGCT AACCGGTGTC AGCAACTCGA TGACCGGGTG TAGTTCCTCC
TTTACCGGTA CTAGCAATAG CATGACAGGC AGTAGCCATA GCATGACCGG CATGAGCACC
AGCATCACCG GGCATAGCAT GAGTCAGACG GGTTCCAGTA GCAGCATCAC CGGTGACAGT
ACCTCCTTTA CCGGCAGCAG CGTCAGCAGT ACGGGCAGCA GCGTCAGTAC GACCGGTGTT
AGCACCAGCA CTACGGGGAG TAGCACCTCG ACTACCGGTT GTAGCGTCAG TACTACGGGT
AGCAGCACCT CGACTACCGG TAATTCAGTC AGCATGACCG GTAACAGCAC CAGTACCACG
GGATGCAGTA TTTCCACGAC GGGCAGCAGT ATTGGGACGG TAGGAAGCAG TATCAGCACC
ACGGGCAGTA GCGTCAGTAC CACCGGTAGC AGTATCAGCA CCACGGGATT ATCCGTCAGT
TATACCGGCG CTCAATATTC CGATGTGGGT GTCGATCTGA AAACCGTTGG CATGCAAAGC
AAAAACTGA
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| Protein sequence | MQLIEIENEV LSGQDAFPLS FKTQEKVSGN PSYQLVFQVA EADLDLVSLL GEIIKVRIEL
PDSAGYRTFF TYVIAGADEG QRQDKFVYSL ELSTWTWFLM QNRNCRIFQD LNIIDIIEQV
FSKYNFADYR FDIVGNYRLR EYCVQFAETD FDFVNRLMED EGVWYYFEHN EDKHTLVMTD
QQQFPVLEGH YAELSFLPDS EEMRAIREGI QRIQRSQRIH SSEIVLRDFD FLNPRNTLQT
HIEESRQHLQ GVPLEWYDYA AGYTDPQHGE SIARLRLEAI QSNGQLLSGE SNATGLVPGR
SFALVQHPDN NRNRGFKLIS CDYSFVQDGP DSASQGRNVA CKFKALNDDV VYRPQCVTPP
PKVPGVQSAT VVGARESEVH TDKFARIRVH FHWDRYKTTE DDSSCWIRVV QAWAGKGWGV
LAMPRVGQEV LVNYVDGDLD RPMVTGIVYN GENPPPYRLP DHINYSGFVS RSLRFGQPQH
ASQLTFDDNR GNERIMLHAE RDLQRTVERN SATAVGQDKY DTVERTATEW INNHISYKDF
SFSVTGMSVS ATGISVSTTG TSLSVTGMST SVTGVSVGFT LIGTSFTGVS ASFTGVSTSF
TGASNSLTGV SNSMTGCSSS FTGTSNSMTG SSHSMTGMST SITGHSMSQT GSSSSITGDS
TSFTGSSVSS TGSSVSTTGV STSTTGSSTS TTGCSVSTTG SSTSTTGNSV SMTGNSTSTT
GCSISTTGSS IGTVGSSIST TGSSVSTTGS SISTTGLSVS YTGAQYSDVG VDLKTVGMQS
KN
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