| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3419 |
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| Symbol | rapA |
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| ID | 5386253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3847096 |
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| End bp | 3850002 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866432 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_001402374 |
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| Protein GI | 153949731 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTTA CACTTGGTCA ACGCTGGATC AGCGACACAG AAAGCGAACT TGGATTGGGT
ACTGTCGTTG CCATTGACGT GCGCATGATC ACCTTACTGT TCCCTGCAAC CGGTGAAAAC
CGCCTTTACG CCAGAAATGA CTCGCCAATC ACCCGGGTCA TGTTCAATCC GAGCGATACC
ATCACTCACC ACGAAGGCTG GCAGCTGAAA GTGGAAGAAG TGACTCAAGA AAATGGGCTG
ATTACCTATA TCGGTACCCG TTTGGATACT GAGGAAACCG GCGTCGCCAT GCGTGAAGTT
TTGCTCGATA GCAAACTGAC TTTTAGTAAA CCACAGGATC GCTTATTCGC CGGTCAGATC
GATCGCATGG ATCGCTTTGC CCTGCGTTTT CGCGCCCGTA AATACCAAAG CGAGCAGTTC
CGGTTGCCGT GGAGCGGCCT GCGTGGTATC CGTGCCAGCC TGATCCCACA CCAGTTACAT
ATCGCTTATG AAGTGGGTCA GCGCCACGCG CCACGGGTCT TACTGGCCGA TGAAGTGGGG
TTGGGTAAAA CCATCGAAGC CGGGATGATT ATCCACCAGC AACTGCTGGC TGGCCGTGCT
GAACGGGTGC TGATCGTGGT ACCGGAGAGC CTGCAACACC AGTGGCTAGT AGAGATGTTA
CGCCGCTTCA ACCTGCGCTT CTCACTGTTT GATGACAGCC GTTATTCCGA AGCCTTGTTG
GACAGTAGCA ATCCGTTTGA TACCGAACAG ATGGTGATTT GTTCGCTGGA TTTTGTTCGT
CGGAATAAGC AGCGGTTAGA ACAACTGGCC GATGCTTCCT GGGATCTGCT GGTGGTGGAT
GAAGCGCACC ATCTGGCCTG GAGTGAAGAG GCTCCAAGCC GCGAATATCA AGTGATTGAA
CAGTTGGCCG AGCATATCCC CGGCGTGCTG TTATTGACAG CAACACCAGA GCAATTGGGC
CAACAGAGTC ACTTTGCCCG CCTGCGTTTG CTGGATCCAG ATCGCTTCCA TGATTACGAA
GAGTTCGTCA ATGAACAACA GAAATACCGG CCTATCGCCG ATGCCGTCAC CTTGCTGTTA
GGGGGCGAGC GTTTAACCGA TGATAAGCTG AATCTGTTAG GTGAACTGAT TGATGAACAA
GATATTGAGC CACTACTGAA AGCGGCCAAT AGCCAAAGTG AAGACAGCGA AGCGGCGCGT
CAAGAATTAG TTACCATGCT GATGGATAGG CACGGTACTA GCCGGGTGCT GTTCCGTAAT
ACCCGTAATG GGGTAAAAGG CTTCCCGCAC CGCGTCTTAC ACCAAATTAA GCTGCCATTG
CCAACACAGT ACCAAACTGC AATTAAGGTC TCTGGCATCA TGGGGGCGAA GAAAACCCTC
GACGCTCGTG CAAAAGATAT GCTTTATCCC GAGCAAATCT ATCAGGAGTT TGAAGGCGAA
AACGCCACCT GGTGGAACTT TGACCCACGG GTTGAATGGC TACTGAACTA TTTGGTTGCC
AACCGGGGTG AGAAGGTGTT GGTGATCTGC GCACAAGCCG CTACAGCTTT GCAGCTTGAA
CAAGTGTTAC GTGAGCGTGA AGCTATTCGG GCCGCCGTCT TCCATGAAGG TTTATCGCTG
ATTGAACGTG ACCGTGCCGC CGCCTATTTT GCCTCAGAAG AAGATGGTGC TCAGGTCTTA
CTGTGTTCCG AAATTGGTTC AGAGGGGCGT AACTTCCAAT TTGCCTGCCA ACTGGTCATG
TTCGATTTGC CGTTCAACCC CGATCTCCTG GAGCAACGTA TTGGCCGTTT GGATCGTATC
GGCCAGAACC GTGAAATCCA GATTATGGTG CCTTATTTGG AAGACACCGC GCAGGCAATA
CTGGTTCGTT GGTACCACGA AGGGTTGGAT GCGTTCGAAC ACACCTGCCC AACAGGCCGT
ACCATTTATG ACAGCAGCTA TCAGGAACTG ATTAGCTATT TGGCCACGCC AAGTGAGCAG
GAAGGGTTGG ATGAGTTTAT CCACACCTGC CGTCAGCAGC ACGAAGGGTT AAAACTTCAG
TTGGAACAGG GCCGTGACCG CTTACTGGAG ATGCACTCTA ACGGTGGCGA ACATGGGCAG
GAGCTGGCAC AGAGCATTGC CGAACAAGAT AATGACATCA ATTTAGTCAG TTTTGCACTC
AACCTGTTCG ATATTGTCGG GATCAACCAG GAAGATCGTA GCGATAACCT GATCGTGCTG
ACCCCGTCCG ATCACATGCT GGTGCCCGAT TTCCCCGGTT TGCCACCAGA TGGCTGCACC
GTCACCTTTG ATCGTGAACA GGCACTCTCG CGGGAAGATG CCCAGTTTGT CAGTTGGGAA
CACCCCATCA TCCGTAATGG GTTGGATTTG ATCCTGTCTG GCGATACCGG CAGTTGCGCG
GTGTCTTTAT TGAAAAATAA AGCCTTACCC GTCGGTACCC TGCTGGCTGA GTTGGTTTAC
GTGGTCGAGG CACAAGCACC GAAACACTTG CAACTGACCC GTTTCTTGCC ACCGACCCCC
GTGCGTATGC TCATGGATCG CAACGGCACT AACCTGGCGG CACAGGTTGA ATTTGAAAGT
TTCAATCGCC AACTGAATGC GGTAAACCGC CATACCTCCA GCAAGCTGGT CAATGCGGTT
CAGCAAGAAG TTCACACCAT GTTGCAACAA GCCGAAGCAC TGGTAGAAGC GCAAGCGCAG
GCTCTGATTG AAACGGCAAA ACGCGAGGCC GATGATAAGT TGAGTACTGA ACTGGCGCGT
CTGGAAGCGT TGAAAGCGGT TAACCCGAAT ATTCGTGATG ACGAAATAGA GGCGCTTGAG
CATAACCGTA AGATGGTGCT GGAAAACCTG AATCAAGCAG GCTGGCGTTT AGATGCTATC
CGGCTGGTGG TGGTAACACA TCAGTAG
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| Protein sequence | MPFTLGQRWI SDTESELGLG TVVAIDVRMI TLLFPATGEN RLYARNDSPI TRVMFNPSDT
ITHHEGWQLK VEEVTQENGL ITYIGTRLDT EETGVAMREV LLDSKLTFSK PQDRLFAGQI
DRMDRFALRF RARKYQSEQF RLPWSGLRGI RASLIPHQLH IAYEVGQRHA PRVLLADEVG
LGKTIEAGMI IHQQLLAGRA ERVLIVVPES LQHQWLVEML RRFNLRFSLF DDSRYSEALL
DSSNPFDTEQ MVICSLDFVR RNKQRLEQLA DASWDLLVVD EAHHLAWSEE APSREYQVIE
QLAEHIPGVL LLTATPEQLG QQSHFARLRL LDPDRFHDYE EFVNEQQKYR PIADAVTLLL
GGERLTDDKL NLLGELIDEQ DIEPLLKAAN SQSEDSEAAR QELVTMLMDR HGTSRVLFRN
TRNGVKGFPH RVLHQIKLPL PTQYQTAIKV SGIMGAKKTL DARAKDMLYP EQIYQEFEGE
NATWWNFDPR VEWLLNYLVA NRGEKVLVIC AQAATALQLE QVLREREAIR AAVFHEGLSL
IERDRAAAYF ASEEDGAQVL LCSEIGSEGR NFQFACQLVM FDLPFNPDLL EQRIGRLDRI
GQNREIQIMV PYLEDTAQAI LVRWYHEGLD AFEHTCPTGR TIYDSSYQEL ISYLATPSEQ
EGLDEFIHTC RQQHEGLKLQ LEQGRDRLLE MHSNGGEHGQ ELAQSIAEQD NDINLVSFAL
NLFDIVGINQ EDRSDNLIVL TPSDHMLVPD FPGLPPDGCT VTFDREQALS REDAQFVSWE
HPIIRNGLDL ILSGDTGSCA VSLLKNKALP VGTLLAELVY VVEAQAPKHL QLTRFLPPTP
VRMLMDRNGT NLAAQVEFES FNRQLNAVNR HTSSKLVNAV QQEVHTMLQQ AEALVEAQAQ
ALIETAKREA DDKLSTELAR LEALKAVNPN IRDDEIEALE HNRKMVLENL NQAGWRLDAI
RLVVVTHQ
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