| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3409 |
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| Symbol | setA |
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| ID | 5388394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3834737 |
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| End bp | 3835918 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866424 |
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| Product | sugar efflux transporter A |
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| Protein accession | YP_001402366 |
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| Protein GI | 153950388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00899] sugar efflux transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCTG CACGAGCCTT TTCCCGTCGT ATCAACCCGG TTTTCCTCGC TTTCTTTGTG
GTGGCTTTTC TTTCCGGCAT CGCGGGTGCG TTGCAAGCCC CGACATTAAG CCTGTTTTTA
AGCACAGAGT TAAAAGTGCG TCCGCTGTGG GTCGGATTGT TTTATACCGT GAATGCCATT
GCCGGTATCA CCGTGAGCTT CCTACTGGCC AAACGCTCAG ATCTGGGTGG GGATCGGCGT
AAATTAATTC TGATCTGCTA TCTGATGGCG GTCGGAAATT GCCTGCTATT CGCCTTTAAT
CGTGATTATC TGACGTTGAT CACTTTAGGT GTTTTGATGG CCTCGGTGGC GAATACCGCG
ATGCCGCAAA TTTTCGCCTT GGCACGGGAA TATGCGGATA ACTCTGCGCG TGAAGTGGTG
ATGTTCAGTT CGATTATGCG TGCGCAATTA TCATTGGCTT GGGTTATCGG GCCACCGCTG
TCATTTATGT TAGCGCTGAA TTATGGCTTT ACGCTGATGT TTAGCATTGC CGCCGGTATT
TTTGTTATTA GTGCGCTGGT GGTCTGGTTT ATCCTGCCGT CGGTTAAACA GCCTGAGCCC
GTAGCCGATG CCCCCGTGGT GGTACAAGGC AGTTTGTTTG CCGATAAAAA TGTCTTACTG
CTGTTCATTG CCTCAATGCT GATGTGGACG TGTAATACCA TGTACATCAT TGATATGCCG
CTCTATATCA CCGCTAATTT AGGGTTGCCT GAGCGTTTGG CGGGTTTGCT GATGGGGACC
GCCGCCGGGC TGGAAATTCC TATCATGTTG TTGGCAGGTT ACTCGGTTAG GCGCTTTGGT
AAACGTAAAA TCATGCTGTT TGCGGTGATG GCGGGGGTGC TGTTTTATAC CGGGCTGGTG
CTGTTTAAAT TCAAAACCGC ACTGATGATA TTGCAGATTT TTAATGCCAT CTTTATCGGC
ATCGTCGCCG GTATTGGTAT GCTCTATTTT CAGGATCTCA TGCCGGGGCG GGCAGGTGCC
GCAACCACGT TATTTACCAA CAGTATTTCT AGTGGGGTGA TTTTGGCCGG TGTGCTGCAA
GGTGTATTGA CTGAAACCTG GGGGCATAAT GCGGTTTATG TCGCTGCGAT GGTGTTGGTT
ATTTTGGCGT TGATCATCTG CGCCAAAGTG AGAGAGGCTT AG
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| Protein sequence | MRSARAFSRR INPVFLAFFV VAFLSGIAGA LQAPTLSLFL STELKVRPLW VGLFYTVNAI
AGITVSFLLA KRSDLGGDRR KLILICYLMA VGNCLLFAFN RDYLTLITLG VLMASVANTA
MPQIFALARE YADNSAREVV MFSSIMRAQL SLAWVIGPPL SFMLALNYGF TLMFSIAAGI
FVISALVVWF ILPSVKQPEP VADAPVVVQG SLFADKNVLL LFIASMLMWT CNTMYIIDMP
LYITANLGLP ERLAGLLMGT AAGLEIPIML LAGYSVRRFG KRKIMLFAVM AGVLFYTGLV
LFKFKTALMI LQIFNAIFIG IVAGIGMLYF QDLMPGRAGA ATTLFTNSIS SGVILAGVLQ
GVLTETWGHN AVYVAAMVLV ILALIICAKV REA
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