Gene YpsIP31758_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3406 
SymbolleuB 
ID5386449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp3831356 
End bp3832447 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content51% 
IMG OID640866421 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001402363 
Protein GI153949839 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAGA CTTATCATAT TGCAGTGTTG CCCGGCGACG GTATCGGCCC TGAAGTAATG 
GATCAGGCAA GTAAAGTATT GGATGCGGTG CGTCAGCGCT TCGGTCTCAA GATTTCAACC 
AGTGTTTACG ATGTTGGTGG CGCTGCCATT GACCGCCATG GTAGCCCATT ACCGGCAGCA 
ACGGTCGCGG GATGTGAACA GGCAGATGCC ATTTTATTTG GCTCCGTAGG CGGCCCTAAA 
TGGGAACACC TGCCACCAGC AGAACAACCT GAGCGTGGCG CATTATTGCC CTTGCGTAAA 
CATTTCAAAT TATTCAGTAA CTTGCGCCCT GCCCGTTTGT ATCAAGGATT GGAGGACTTC 
TGTCCATTGC GCAGTGATAT CGCGGCCAGA GGTTTTGATA TCCTGTGTGT CCGTGAATTA 
ACCGGCGGTA TCTATTTCGG CCAGCCGAAA GGCCGTGAAG GCCAAGGCAT GCACGAGCGG 
GCCTTTGACA CCGAAGTTTA TCATCGCTTC GAAATTGAAC GTATCGCCCG TATTGCTTTC 
GAATCAGCCC GCAAACGCCG TAGTAAAGTG ACGTCCATTG ATAAAGCCAA CGTGTTGCAA 
AGCTCAATCT TGTGGCGTGA AGTGGTCAAC GGGATCGTGG CAGATTACCC GGATGTTGCG 
TTGTCCCATA TGTACATTGA TAACGCCACC ATGCAGTTAA TCAAAGACCC TTCCCAATTT 
GACGTGTTGC TGTGCTCTAA CTTGTTTGGC GATATCTTGT CCGATGAATG CGCCATGATC 
ACCGGCTCCA TGGGCATGTT GCCATCAGCC AGTTTGAATG AACAAGGTTT TGGTCTATAT 
GAACCTGCAG GCGGTTCCGC ACCGGATATC GCGGGTAAGA ACATTGCCAA CCCTATCGCT 
CAGATCCTGT CATTAACCCT GTTGCTGCGT TTTAGCTTAG GTAAAGATGA TGCCGCTGAC 
GCCATTGAGC GCGCGATCAA TCAGGCATTG GAGCAAGGTT ATCGTACTGC GGATTTAGCC 
GGGGATGGTC ACGCAATCGG CACTCACGAA ATGGGCGATA TCATCGCTAA ATTCGTGGTT 
GAGGGGGTAT AA
 
Protein sequence
MTKTYHIAVL PGDGIGPEVM DQASKVLDAV RQRFGLKIST SVYDVGGAAI DRHGSPLPAA 
TVAGCEQADA ILFGSVGGPK WEHLPPAEQP ERGALLPLRK HFKLFSNLRP ARLYQGLEDF 
CPLRSDIAAR GFDILCVREL TGGIYFGQPK GREGQGMHER AFDTEVYHRF EIERIARIAF 
ESARKRRSKV TSIDKANVLQ SSILWREVVN GIVADYPDVA LSHMYIDNAT MQLIKDPSQF 
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA 
QILSLTLLLR FSLGKDDAAD AIERAINQAL EQGYRTADLA GDGHAIGTHE MGDIIAKFVV 
EGV