Gene YpsIP31758_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3401 
SymbolilvB1 
ID5385441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3823075 
End bp3824802 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content50% 
IMG OID640866416 
Productacetolactate synthase 3 catalytic subunit 
Protein accessionYP_001402358 
Protein GI153947869 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 
TIGRFAM ID[TIGR00118] acetolactate synthase, large subunit, biosynthetic type 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATGT TGTCAGGAGC CGAGATGGTG GTCCGATCGT TAATTGATCA GGGCGTTAAG 
CATGTATTCG GTTATCCCGG CGGGGCCGTA CTTGATATTT ACGATGCCCT GCACACGGTC
GGAGGCATCG ATCACGTGCT GGTGCGCCAT GAACAAGGTG CGGTTCACAT GGCCGATGGT
TATGCGCGGG CAACGGGCGA GGTCGGTGTT GTACTGGTCA CGTCTGGTCC TGGTGCAACC
AATGCGATTA CCGGTATTGC GACCGCCTAT ATGGATTCAG TGCCAATGGT GGTGCTTTCA
GGCCAAGTGC CAAGCTCATT GATTGGTTTT GATGCCTTCC AAGAATGTGA CATGGTGGGG
ATCTCCCGCC CAGTGGTCAA ACATAGCTTC TTGGTTAAGC GCACAGAAGA CATCCCGATG
GTGTTGAAAA AAGCCTTTTA TCTGGCATCC ACTGGCCGTC CCGGTCCGGT GGTTATCGAC
TTGCCAAAAG ACATTGTCGG CCCAGCAGTA AAAATGCCTT ACGCCTATCC AGAGCAAGTC
AGTTTGCGCT CCTATAATCC TACGGTGCAA GGCCACCGTG GGCAGATTAA GCGTGCACTG
CAAACGATTA TGGCGGCTAA ACGGCCCATT ATGTATGTCG GTGGTGGTGC GATTAACGCC
GCTTGCCATG AAGAATTACT GATATTGGCA GAGAAGCTGA ACTTACCGGT AACCAGCTCT
CTGATGGGGC TAGGCAGTTT CCCTGGTACG CATCGCCAAA GTGTCGGCAT GTTGGGGATG
CATGGTACCT TTGAAGCCAA TATGGCCATG CACAATACTG ATCTGATTTT TGCCGTCGGT
GTCCGTTTTG ACGATCGTAC CACCAATAAT TTAGCAAAAT ATTGCCCTGA TGCCACAGTG
CTACACATTG ATATCGATCC GACATCGATC TCGAAAACGG TCACCGCCGA TATCCCGATT
GTGGGTGATG CCAAACAAGT ACTGACACAA ATGTTAGATT TGTTGTCGCA GGTCGGCTGT
ACACAAGATT TTGATAGCTT GCGCGATTGG TGGCAATCCA TTGAACAATG GCGCACCCGT
AATTGCTTGG GCTACAACAA AGACAGTGGG AAAATCAAGC CACAAGCGGT GATTGAAGCC
TTACATCGTC TGACTAAAGG CGATGCGTAC GTTACCTCTG ATGTGGGCCA ACATCAGATG
TTTGCGGCTC TTTACTATCC CTTTGATAAG CCACGTCGTT GGATTAACTC CGGTGGCTTG
GGCACGATGG GCTTTGGCTT GCCAGCGGCG CTTGGGGTTA AATTGGCTTT GCCTAATGAA
ACCGTCGTTT GTGTGACCGG TGATGGCAGT ATCCAGATGA ATATTCAGGA GTTATCAACC
GCACTGCAAT ATAACTTGCC AGTGTTGGTA TTAAACCTGA ATAACCGCTA TCTGGGGATG
GTGAAACAAT GGCAGGACAT GATTTATTCA GGCCGCCATT CTCAGTCGTA TATGGATTCG
CTGCCTGATT TTGTCAAGTT GGCTGAAGCC TATGGCCATA TTGGTGTGGC TATTAATACG
CCGGATGAGC TGGAAAGTAA GCTGGCAGAC GCACTGACAC AATTATCCGA AACCAATCGT
TTGGTCTTTG TGGATGTGAC TGTCGATGAA ACAGAACATG TTTACCCGAT GCAGATTCGT
GGTGGTGGCA TGGACGAAAT GTGGCTAAGC AAAACGGAGA GGACTTAA
 
Protein sequence
MEMLSGAEMV VRSLIDQGVK HVFGYPGGAV LDIYDALHTV GGIDHVLVRH EQGAVHMADG 
YARATGEVGV VLVTSGPGAT NAITGIATAY MDSVPMVVLS GQVPSSLIGF DAFQECDMVG
ISRPVVKHSF LVKRTEDIPM VLKKAFYLAS TGRPGPVVID LPKDIVGPAV KMPYAYPEQV
SLRSYNPTVQ GHRGQIKRAL QTIMAAKRPI MYVGGGAINA ACHEELLILA EKLNLPVTSS
LMGLGSFPGT HRQSVGMLGM HGTFEANMAM HNTDLIFAVG VRFDDRTTNN LAKYCPDATV
LHIDIDPTSI SKTVTADIPI VGDAKQVLTQ MLDLLSQVGC TQDFDSLRDW WQSIEQWRTR
NCLGYNKDSG KIKPQAVIEA LHRLTKGDAY VTSDVGQHQM FAALYYPFDK PRRWINSGGL
GTMGFGLPAA LGVKLALPNE TVVCVTGDGS IQMNIQELST ALQYNLPVLV LNLNNRYLGM
VKQWQDMIYS GRHSQSYMDS LPDFVKLAEA YGHIGVAINT PDELESKLAD ALTQLSETNR
LVFVDVTVDE TEHVYPMQIR GGGMDEMWLS KTERT