Gene YpsIP31758_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3393 
Symbol 
ID5387584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3815167 
End bp3816930 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content53% 
IMG OID640866408 
Productpenicillin-binding protein 
Protein accessionYP_001402350 
Protein GI153947975 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAG CGCGCCCCGG GAAGTTAAAG CGTCAGGAAG AACAAGCCAG CTTTATTAGC 
TGGCGTTTTG CGTTGCTGTG CGGTTGTATT TTACTGGCAT TGGTTGGGCT GATTATGCGT
ACCGCATACC TGCAAGTGAT CAACCCCGAT AAGCTGGTGC GCGAGGGGGA TATGCGCTCG
CTGCGAGTAC AAGAGGTGCC GACGGCGCGT GGCATGATAA GCGATCGCTC TGGCCGCCCT
TTGGCGGTCA GTGTACCCGT CAATGCGGTT TGGGCCGATC CAAAAGAACT GATTGAACAG
GGGGGGATCT CTCTGGATAC CCGCTGGAAA GCCCTGTCGG ATGCATTAGA AATCCCTTTA
GATCAACTTG CCACGCGCAT TAATGCCAAT CCAAAAGGCC GCTTTGTCTA TCTGGCCCGT
CAGGTGAACC CCGCGATTGG CGACTACATC CGCAAGCTGA AATTACCCGG TATCCATCTA
CGTCAGGAAT CCCGTCGCTA CTATCCGGCA GGTCAGGTGA TGGCTCACAT TATTGGTGTG
ACCAATATCG ATGGGCAAGG GATTGAAGGT GTTGAGAAAA GTTTTGATCG CTGGCTCACC
GGCCAACCGG GCGAGCGAAC GGTGCGCAAA GACCGTTATG GCCGTGTTAT TGAAGATATC
TCCTCTGTTG ACAGCCAGGC GGCGCATAAC CTGGTGCTGA GTGTGGACGA GCGTTTGCAG
GCGTTGGTGT ACCGCGAGCT CAATAATGCG GTGGCGTTTA ACAAAGCAGA ATCGGGCACG
GCGGTATTAG TCGATGTGAA CACCGGTGAA GTCTTGGCGA TGGCGAACAG CCCGTCTTAC
AACCCGAATA ACCTAACCGG TACGCCGAAA GACGCGATGC GTAACCGGGC AATAACCGAT
ATTTTTGAAC CCGGCTCGAC AGTCAAGCCA ATGGTAGTGA TGACGGCCTT ACAGCATGGT
GTTGTGAAAG AGAACAGTGT GCTGAATACC TTGCCGTACT TTGTTAACGG TCACCAGATT
AAAGACGTGG CCCGTTACGC TGAGCTATCC GTCACTGGGA TCTTACAGAA GTCGAGTAAC
GTCGGTGTTT CTAAACTGGC GTTAGCGATG CCATCCTCAG CGTTAGTAGA TACTTACTCA
CGGTTTGGGT TTGGGAAAGC GACCAATTTG GGGTTGGTCG GAGAAAGCAG TGGCTTATAT
CCTAAAAAAC AACGGTGGTC TGACATAGAG AGGGCCACCT TCTCTTTTGG CTACGGGCTA
ATGGTAACAC CGTTACAACT AGCGCGAGTC TATGCAACCA TCGGCAGCAT GGGGGTCTAT
CGCCCGCTGT CGATAACCCG AGTTGACCCA CCTGTCGCCG GTGAACGCAT CTTCCCTGAA
CCCCTGGTAC GCACCGTGGT TCATATGATG GAAAGCGTGG CACTGCCTGG CGGTGGTGGT
ACCAAAGCGG CGATCAAAGG TTACCGTATC GCGATTAAAA CCGGTACGGC CAAAAAAGTC
GGTCCCGATG GCAAGTATAT GGATCGATAC CTCGCTTACA CCGCTGGCGT TGCGCCCGCG
AGTAACCCTC GATTTGCTCT GGTTGTGGTG ATCAATGACC CACAGGCAGG GAAATATTAC
GGTGGTGCGG TTTCTGCACC GGTATTCGGT GCCATCATGG GCGGCGTTTT GCGTACCATG
AACATTGAGC CAGATGCGTT ACCCACCGGT GATAAAAGCG AATTAGTGAT TAATACAAAA
GAGGGTTCAG GTGGCAGATC GTAA
 
Protein sequence
MKTARPGKLK RQEEQASFIS WRFALLCGCI LLALVGLIMR TAYLQVINPD KLVREGDMRS 
LRVQEVPTAR GMISDRSGRP LAVSVPVNAV WADPKELIEQ GGISLDTRWK ALSDALEIPL
DQLATRINAN PKGRFVYLAR QVNPAIGDYI RKLKLPGIHL RQESRRYYPA GQVMAHIIGV
TNIDGQGIEG VEKSFDRWLT GQPGERTVRK DRYGRVIEDI SSVDSQAAHN LVLSVDERLQ
ALVYRELNNA VAFNKAESGT AVLVDVNTGE VLAMANSPSY NPNNLTGTPK DAMRNRAITD
IFEPGSTVKP MVVMTALQHG VVKENSVLNT LPYFVNGHQI KDVARYAELS VTGILQKSSN
VGVSKLALAM PSSALVDTYS RFGFGKATNL GLVGESSGLY PKKQRWSDIE RATFSFGYGL
MVTPLQLARV YATIGSMGVY RPLSITRVDP PVAGERIFPE PLVRTVVHMM ESVALPGGGG
TKAAIKGYRI AIKTGTAKKV GPDGKYMDRY LAYTAGVAPA SNPRFALVVV INDPQAGKYY
GGAVSAPVFG AIMGGVLRTM NIEPDALPTG DKSELVINTK EGSGGRS