Gene YpsIP31758_3379 details

Gene Information

• Locus tag: YpsIP31758_3379
• Symbol: secM
• ID: 5384702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 3799506
• End bp: 3800039
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640866394
• Product: SecA regulator SecM
• Protein accession: YP_001402336
• Protein GI: 153947714

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0000000979171
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGGTA TTCTAAATCG TTGGCGACAA TTTGGCAGAC GTTATTTCTG GCCGCATCTC 
CTGTTGGGGA TGGTCGCGGC GAGTCTTGGT GTGCCATCAA ATCTGTCTGG CGTTCCAGAC 
CATGCGGCAT TAGCGAACAC ATCATCCAGC CAAAGTCGTC AGAATCATGG TACGACAAAC 
TTCAACAGTT TGGCACTGTT GCATGACATA CACCGTCGCC CCTCATTCAG TGTAGATTAC 
TGGCAACAGC ATGCCCTGCG CACGGTCATC CGTCACCTCT CTTTTGCTCT GGCACCACAA 
GCGGCATATG CACGCGTACA AGAAGTCGCC GAAACAGAAC GGGTTGCTCC ATCAAAAATT 
CAGCAACTCG CGTTACTGGA TACGCTAAAT GCACTACTGA CGCATGAATT TAAGCCACCG 
GCCATTATTC GCTATACAGA ACAGGTTGAA CGGCCTGTTC TGTCGCCATA TAAACCTGGG 
CTCTGGCTTG CTCAAGTACA AGGTATTCGT GCCGGTCCTG CCAACTTAAG CTAA 

 

Protein sequence

MIGILNRWRQ FGRRYFWPHL LLGMVAASLG VPSNLSGVPD HAALANTSSS QSRQNHGTTN 
FNSLALLHDI HRRPSFSVDY WQQHALRTVI RHLSFALAPQ AAYARVQEVA ETERVAPSKI 
QQLALLDTLN ALLTHEFKPP AIIRYTEQVE RPVLSPYKPG LWLAQVQGIR AGPANLS