| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3378 |
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| Symbol | secA |
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| ID | 5388247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3796714 |
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| End bp | 3799428 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640866393 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001402335 |
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| Protein GI | 153947243 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000297957 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATTA AATTATTAAC CAAAGTTTTT GGTAGCCGTA ACGATCGTAC TCTGCGCCGC
ATGCAAAAAG TAGTTGATGT CATCAACCGC ATGGAACCTG ATATTGAAAA ACTGACAGAC
ACCGAATTGC GCGCTAAAAC GGATGAGTTC CGTGAGCGTT TAGCGAAAGG TGAAGTGTTG
GAAAACTTAA TTCCTGAAGC CTTTGCGGTC GTTCGTGAAG CGAGTAAGCG TGTGTTCGGT
ATGCGTCACT TCGACGTGCA ACTGCTGGGT GGGATGGTTC TGAATGAGCG TTGTATCGCA
GAAATGCGTA CAGGTGAAGG TAAAACCTTG ACCGCAACCC TGCCTGCTTA CCTGAATGCG
TTGAGTGGCC GTGGCGTGCA TGTGGTTACC GTCAACGACT ATTTGGCTCA ACGTGACGCC
GAAAATAACC GCCCCTTGTT TGAGTTTTTG GGGCTGAGCA TTGGTATCAA TTTACCGAAT
ATGACTGCGC CAGCCAAACG CGCAGCCTAT GCCGCTGATA TCACTTACGG TACCAATAAC
GAATTCGGTT TCGACTATTT ACGCGATAAT ATGGCGTTCA GTCCTGAAGA GCGTGTGCAG
CGTCAACTTC ACTATGCGTT AGTCGATGAA GTCGACTCCA TCCTGATTGA TGAAGCTCGG
ACCCCGCTGA TTATCTCCGG CCCCGCCGAA GACAGTTCCG AAATGTATAT TCGGGTTAAC
AAACTGATTC CAAAACTGAT TCGTCAGGAA AAAGAAGACT CGGACAGCTT CCAGGGGGAA
GGTCACTTCT CGGTAGATGA GAAATCACGT CAGGTTCATT TGACTGAGCG CGGTCTGATT
CTGATTGAAC AGATGTTGGT TGAAGCGGGC ATCATGGATG AAGGCGAATC ACTGTATTCG
CCTGCTAACA TTATGTTGAT GCACCATGTC ACGGCCGCCT TGCGTGCTCA TGTGCTGTTT
ACCCGTGACG TTGACTATAT CGTGAAAGAC GGTGAAGTGA TTATTGTTGA CGAACATACT
GGTCGTACGA TGCAAGGTCG CCGCTGGTCT GATGGTTTGC ATCAGGCGGT TGAAGCGAAG
GAAGGCGTGG AAATCCAGAA TGAAAACCAG ACACTGGCTT CTATCACTTT CCAGAACTAT
TTCCGTCTCT ATGAAAAACT GGCTGGGATG ACGGGTACCG CAGATACCGA AGCATTTGAA
TTCAGCTCAA TTTACAAGTT AGATACGATT GTCGTTCCGA CTAACCGTCC TATGATCCGT
AAGGATTTGG CTGATCTGGT CTATATGACC GAGCAGGAAA AGATCGGCGC GATTATCGAG
GATATCCGCG AACGTACAGC GAACGGCCAG CCAGTGTTGG TCGGGACCAT CTCGATTGAA
AAATCCGAGG TTGTCTCTGC GGAGTTAACC AAAGCCGGTA TTGAACACAA AGTGTTGAAC
GCTAAATTCC ATGCCATGGA AGCAGAGATT GTTTCTCAGG CCGGTCAGCC AGGGGCGGTA
ACCATCGCCA CAAACATGGC GGGTCGTGGT ACTGACATTG TGCTCGGTGG GAGCTGGCAG
AGCGAGATTG CTGCGCTGGA AGATCCAACT GAAGAGCAAA TTGCGGCAAT TAAAGCCGCT
TGGCAGATTC GCCATGATGC AGTATTGGCA TCGGGTGGTT TACACATCAT TGGTACCGAG
CGCCATGAGT CACGCCGTAT CGATAACCAG TTACGTGGCC GTGCGGGTCG TCAGGGTGAT
GCGGGTTCTT CACGCTTCTA CTTGTCAATG GAAGATGCCT TGATGCGTAT TTTTGCCTCT
GACCGTGTGT CTGGCATGAT GCGTAAATTG GGTATGAAGC CAGGTGAGGC GATTGAACAT
CCATGGGTGA CCAAGGCCAT TGCTAACGCA CAACGTAAAG TTGAAAGCCG TAACTTCGAT
ATTCGTAAGC AACTACTTGA ATATGATGAC GTAGCAAATG ATCAGCGTCG GGCTATCTAC
AGCCAGCGTA ATGAACTGCT GGATGTGTCT GATGTCAGCG AAACCATCAA TAGTATTCGC
GAAGATGTCT TCAAAACCAC CATTGACAGC TACATTCCGA CCCAGTCACT GGAGGAAATG
TGGGATATCG AAGGCCTGGA ACAGCGCCTG AAAAATGATT TTGACTTAGA TATGCCAATT
GCTAAATGGC TGGAAGATGA GCCACAACTG CATGAGGAAA CCTTGCGTGA ACGTATTCTT
CAGCAAGCTA TTGAGACTTA TCAACGCAAA GAGGAAGTTG TTGGCATTGA AATGATGCGT
AACTTCGAGA AAGGCGTGAT GCTGCAAACG CTCGATTCCT TATGGAAAGA GCATTTGGCT
GCAATGGATT ACCTGCGTCA GGGTATCCAC TTACGTGGCT ATGCGCAGAA AGATCCTAAG
CAGGAATATA AGCGTGAATC CTTCGCCATG TTCGCCGCAA TGCTGGAATC ACTGAAATAT
GAAGTGATTA GCGTTCTGAG CAAAGTACAA GTGCGGATGC CGGAAGAGGT CGAAGCGCTG
GAGGTGCAAC GCCGCGAAGA AGCAGAGCGT TTGGCTAGAC AGCAGCAACT GAGCCATCAG
ACTGACAACA GTGCATTGAT GTCAGAAGAA GAGGTAAAAG TTGCTAACAG CCTTGAGCGT
AAAGTGGGGC GTAATGATCC GTGCCCATGT GGTTCGGGTA AGAAATATAA ACAGTGTCAT
GGCCGCTTGC AGTAA
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| Protein sequence | MLIKLLTKVF GSRNDRTLRR MQKVVDVINR MEPDIEKLTD TELRAKTDEF RERLAKGEVL
ENLIPEAFAV VREASKRVFG MRHFDVQLLG GMVLNERCIA EMRTGEGKTL TATLPAYLNA
LSGRGVHVVT VNDYLAQRDA ENNRPLFEFL GLSIGINLPN MTAPAKRAAY AADITYGTNN
EFGFDYLRDN MAFSPEERVQ RQLHYALVDE VDSILIDEAR TPLIISGPAE DSSEMYIRVN
KLIPKLIRQE KEDSDSFQGE GHFSVDEKSR QVHLTERGLI LIEQMLVEAG IMDEGESLYS
PANIMLMHHV TAALRAHVLF TRDVDYIVKD GEVIIVDEHT GRTMQGRRWS DGLHQAVEAK
EGVEIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FSSIYKLDTI VVPTNRPMIR
KDLADLVYMT EQEKIGAIIE DIRERTANGQ PVLVGTISIE KSEVVSAELT KAGIEHKVLN
AKFHAMEAEI VSQAGQPGAV TIATNMAGRG TDIVLGGSWQ SEIAALEDPT EEQIAAIKAA
WQIRHDAVLA SGGLHIIGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDALMRIFAS
DRVSGMMRKL GMKPGEAIEH PWVTKAIANA QRKVESRNFD IRKQLLEYDD VANDQRRAIY
SQRNELLDVS DVSETINSIR EDVFKTTIDS YIPTQSLEEM WDIEGLEQRL KNDFDLDMPI
AKWLEDEPQL HEETLRERIL QQAIETYQRK EEVVGIEMMR NFEKGVMLQT LDSLWKEHLA
AMDYLRQGIH LRGYAQKDPK QEYKRESFAM FAAMLESLKY EVISVLSKVQ VRMPEEVEAL
EVQRREEAER LARQQQLSHQ TDNSALMSEE EVKVANSLER KVGRNDPCPC GSGKKYKQCH
GRLQ
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