| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3357 |
|---|
| Symbol | |
|---|
| ID | 5386858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3771740 |
|---|
| End bp | 3772627 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640866372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001402314 |
|---|
| Protein GI | 153946954 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2510] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000000721544 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCC TCCCAACCCT GTATGGCATT ATTGCGATTT TACTGTGGAG CATGAGTGTC
GCCTTAACAC GTGGGCTGGC CGAAGCACTG GGGCCATTCG GTGCCGGAGC GGCTATCTAC
AGTGTCAGTG GGATTCTGGT ATGGCTAGTG GCAGGTAAGC CTAGAGTACG TGGGCAGCAT
CCCGCTTATC TGTATGGCTG CGGTTTACTG TTTGTGGTGT ATATGGTGGC CTTCGCTCTG
GCAATCGGTA TGGCTAATGA TCGCCAGCAA ACACTGGAGA TAGGCTTAAT CAATTACCTA
TGGCCGAGCC TAATGCTGCT ATTGGCGGTA CCGTTGCTGA AACTCCGCGC CCGTTGGTGG
TTATGGCCGG GGGCGGCTCT CGCTCTATTT GGTGTTATTT GGGTGGTCAG TGGTGGTGAA
GGGCTGGACG TTAAAACGCT CGCCGTAAAT ATCAGCAGCA ACCCGCTGGC GTACAGCCTG
GCGCTGATTG CAGCATTCAC CTGGGCGGGC TACTCCAACT TAGTACGGTT ATATAGCCAA
GGGCCAGGGG CGCTGCCACT GTTTTTAATC GCCTGCGCCC TGTGCCTGTG GTTGATGTTC
TTTATGTGGA CTCCGGGCAA ATTGCACTTT ACCCCACGAG CCATATTTGA ATTGTTACTC
ATGGGCGCGA ATACCGCACT GGCCTACCAA TGCTGGGATA GCGCAATGAA AAAAGGCAAC
GCCACACTGG TCGCGGCCCT ATCCTATTTC ACGCCATTGT TATCAATATT GATCGCCAGC
GTGTGGCTCA ATACCTTGCC TTCTGCGGCT TTCTGGCCTG GCGTTGCCAT GGTTGTAGCA
GGTTCGTTGC TATGCTGGTC AGCCAGCCGA AATCCCCTTC GTACTTGA
|
|---|
| Protein sequence | MNRLPTLYGI IAILLWSMSV ALTRGLAEAL GPFGAGAAIY SVSGILVWLV AGKPRVRGQH
PAYLYGCGLL FVVYMVAFAL AIGMANDRQQ TLEIGLINYL WPSLMLLLAV PLLKLRARWW
LWPGAALALF GVIWVVSGGE GLDVKTLAVN ISSNPLAYSL ALIAAFTWAG YSNLVRLYSQ
GPGALPLFLI ACALCLWLMF FMWTPGKLHF TPRAIFELLL MGANTALAYQ CWDSAMKKGN
ATLVAALSYF TPLLSILIAS VWLNTLPSAA FWPGVAMVVA GSLLCWSASR NPLRT
|
|---|
| |