Gene YpsIP31758_3338 details

Gene Information

• Locus tag: YpsIP31758_3338
• Symbol: dksA
• ID: 5388452
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3755423
• End bp: 3755878
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640866353
• Product: RNA polymerase-binding transcription factor
• Protein accession: YP_001402295
• Protein GI: 153946903
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1734] DnaK suppressor protein
• TIGRFAM ID: [TIGR02420] RNA polymerase-binding protein DksA

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.000000258197
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAG GGCAAAAACG TAAAACCTCG TCCTTGAGCA TTCTCGCCAT CGCTGGGGTA 
GAGCCTTACC AAGAGAAGCC AGGCGAAGAG TATATGAACG CCGCCCAGCT GTCGCATTTC 
AAGCTGATTC TTGAAGCATG GCGCAATCAG CTCAGGGATG AAGTAGATCG TACTGTATCG 
CATATGCAAG ACGAAGCTGC TAACTTCCCT GATCCGGTGG ACCGTGCCGC GCAGGAAGAA 
GAATTCAGCC TTGAACTTCG TAACCGCGAC CGCGAGCGTA AACTGATTAA AAAGATCGAG 
AAGACGCTGA AAAAAGTTGA AGATGACGAT TTTGGTTTCT GCGAGTCTTG TGGCGTAGAA 
ATTGGTATCC GTCGTCTTGA GGCACGGCCA ACTGCAGATT TGTGCATTGA CTGTAAAACC 
CTGGCCGAAA TCCGCGAAAA GCAGATGGCA GGCTAA 

 

Protein sequence

MQEGQKRKTS SLSILAIAGV EPYQEKPGEE YMNAAQLSHF KLILEAWRNQ LRDEVDRTVS 
HMQDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIE KTLKKVEDDD FGFCESCGVE 
IGIRRLEARP TADLCIDCKT LAEIREKQMA G