| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3337 |
|---|
| Symbol | sfsA |
|---|
| ID | 5387414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3754498 |
|---|
| End bp | 3755253 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640866352 |
|---|
| Product | sugar fermentation stimulation protein A |
|---|
| Protein accession | YP_001402294 |
|---|
| Protein GI | 153949908 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0000175284 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCTA ACGCCCCGTT ACTGCAATTT ACCCCCCCGT TACAACCCGC CACACTTATT
CTGCGGTACA AACGCTTTTT AGCTGATATT GTGACGCCCG CTGGAGAGGC GCTGACTATT
CATTGCGCGA ATACTGGAGC AATGACGGGT TGTGCTACGC CTGGAGATAC CATCTGGTAT
TCAACATCAG ATAATCCGAA ACGGAAGTAT CCTCAGAGCT GGGAGCTGAC ACAGACCCAA
ACCGGTGATT GGATTTGTGT CAATACGATG CGCGCCAATG AGTTAGTGAA CTTGGCAATT
GAAAAAAATC AGATTGCTGA ATTATCTGGT TACAATTTTG TCAGAAAAGA AGTTAAGTAT
GGCGAAGAGA ACAGCCGTAT AGACTTGTTA TTGCAGGCAG AAGATAGACG TGACTGCTAT
ATTGAAGTCA AATCAGTCAC CTTATTACAA CAACAGTGTG GTTATTTTCC AGATGCGGTT
ACTCTAAGGG GCCAGAAGCA TCTTCGGGAA TTACAAAACA GGGTTGTCAA CGGCCACCGG
GCAGTACTTT TCTTTGCGGT ATTGCATACG GGAATCAAAC AAGTTGCACC AGCCCGACAC
ATTGATCGTC GCTATGCAGA GTTGCTAGTC CAGGCTCAGC AGGCAGGAGT AGAGGTTATT
TGTTATGGTT TTCAACTATC GCCTGACGGT ATCGCGCTAA ACACCCGTTT ACCGTTATTA
CTGGACGAAA TGCTTTCATC AGAAAACGCT GAATAA
|
|---|
| Protein sequence | MPANAPLLQF TPPLQPATLI LRYKRFLADI VTPAGEALTI HCANTGAMTG CATPGDTIWY
STSDNPKRKY PQSWELTQTQ TGDWICVNTM RANELVNLAI EKNQIAELSG YNFVRKEVKY
GEENSRIDLL LQAEDRRDCY IEVKSVTLLQ QQCGYFPDAV TLRGQKHLRE LQNRVVNGHR
AVLFFAVLHT GIKQVAPARH IDRRYAELLV QAQQAGVEVI CYGFQLSPDG IALNTRLPLL
LDEMLSSENA E
|
|---|
| |