| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3323 |
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| Symbol | degP |
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| ID | 5388171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3734727 |
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| End bp | 3736172 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640866338 |
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| Product | serine endoprotease |
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| Protein accession | YP_001402280 |
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| Protein GI | 153950722 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.00403874 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CAACTTTAGT ATTAAGTGCA TTGGCATTGA GCATTGGTTT CGCCATGGGC
CCGGTTTCTT CCGTCGTTGC GGCAGAGACG GCAGCATCGA GTAGCCAGCA GCTCCCTAGC
CTGGCGCCAA TGCTAGAGAA AGTAATGCCT TCAGTGGTCA GTATCAACGT TGAAGGTAGT
GCGCCTGTAA GCAGTGCTGG TGCACGCGGT ATGCCACCAC AATTCCAGCA GTTTTTTGGT
GATAACTCGC CATTCTGTCA GGACGGTTCA CCGTTCCAAG GCTCGCCAAT GTGTCAAGGG
GATCTGGGCG GACTAGGGCA GGGAATGCCA AGTAAGCGGG AATTCCGTTC GCTTGGTTCA
GGTGTCATTA TTGATGCGGG CAAGGGGTAT GTCGTTACCA ATAACCACGT GGTCGATAAT
GCGAACAAGA TCAGCGTAAA ACTGAGCGAT GGCCGCAGTT TTGATGCCAA GGTGATCGGT
AAAGATCCAC GTACCGATAT CGCACTGTTA CAACTGAAAG ACGCTAAAAA TCTGACTGCG
ATTAAGATTG CCAATTCGGA TCAACTGCGT GTCGGTGATT ATACCGTCGC TATCGGGAAC
CCGTATGGCT TGGGTGAAAC CGTGACATCC GGTATTGTCT CTGCTTTAGG GCGCAGTGGT
TTGAATGTAG AAAACTATGA AAACTTTATC CAGACTGATG CGGCGATTAA CCGCGGTAAT
TCCGGCGGCG CATTAATCAA CCTGAACGGT GAGTTGATTG GTATTAACAC CGCTATTCTG
GCACCGGATG GCGGTAACAT TGGTATTGGC TTTGCTATCC CAAGCAACAT GGTGAAGAAC
CTGACATCAC AGATGGTTGA GTTTGGTCAG GTAAAACGCG GTGAACTGGG CATTATGGGG
ACCGAGCTAA ACTCTGAACT GGCAAAAGCC ATGAAGGTTG ATGCGCAGAA AGGTGCCTTT
ATCAGCCAGG TCGTGCCTAA ATCTGCTGCG GCAAAAGCGG GTATCAAAGC GGGCGATATC
ATTGTCAGTA TGAATGGGAA AGCCATCAAT AGTTTTGCAG GGTTCCGCGC CGAGATCGGC
ACGTTACCTG TTGGCAGCAA AATGACCTTG GGTCTGCTGC GTGATGGCAA ACCGATCAAT
GTGAATGTCG TCCTGGAGCA GAGCAGCCAC AGTCAGGTGG AATCCGGTAA TCTCTACACC
GGTATTGAGG GGGCTGAACT GAGTAACAGC GACGTTAGCG GCAAGAAAGG GGTGAAAGTT
GATAGCGTAA AACCAGGCAC TGCTGCGGCG CGTATCGGCC TGAAAAAAGG TGATATCATC
ATGGGGATTA ACCAGCAACC AGTCCAGAAC CTAGGTGAGC TGCGGAAAAT CCTCGATGCT
AAACCACCGG TATTGGCGTT GAATATTCAA CGTGGTGATA CTTCACTCTA TTTATTGATG
CAGTAA
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| Protein sequence | MKKTTLVLSA LALSIGFAMG PVSSVVAAET AASSSQQLPS LAPMLEKVMP SVVSINVEGS
APVSSAGARG MPPQFQQFFG DNSPFCQDGS PFQGSPMCQG DLGGLGQGMP SKREFRSLGS
GVIIDAGKGY VVTNNHVVDN ANKISVKLSD GRSFDAKVIG KDPRTDIALL QLKDAKNLTA
IKIANSDQLR VGDYTVAIGN PYGLGETVTS GIVSALGRSG LNVENYENFI QTDAAINRGN
SGGALINLNG ELIGINTAIL APDGGNIGIG FAIPSNMVKN LTSQMVEFGQ VKRGELGIMG
TELNSELAKA MKVDAQKGAF ISQVVPKSAA AKAGIKAGDI IVSMNGKAIN SFAGFRAEIG
TLPVGSKMTL GLLRDGKPIN VNVVLEQSSH SQVESGNLYT GIEGAELSNS DVSGKKGVKV
DSVKPGTAAA RIGLKKGDII MGINQQPVQN LGELRKILDA KPPVLALNIQ RGDTSLYLLM
Q
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