| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3322 |
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| Symbol | barA |
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| ID | 5388419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3731776 |
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| End bp | 3734568 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866337 |
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| Product | hybrid sensory histidine kinase BarA |
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| Protein accession | YP_001402279 |
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| Protein GI | 153947037 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG4999] Uncharacterized domain of BarA-like signal transduction histidine kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00000885025 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAAT ACAGTCTTCG CGCGCGCATG ATGATTTTAA TCTTGGCACC CACGCTGCTT
CTAGGGCTGT TACTCAGTAC ATCCTTTATG GTCAATCGCT ATAATGAGCT GCAAAACCAA
ATAGTTAGTG CCGGCACCAA TATTATTGAA CCGTTGGCCG TTGCCAGTGA ATACGGGATG
AGCTTCCGCA ACCGCGACAC CGTTCGGCAG TTGATTAATC TACTACACCG AAGGCACTCG
AATATTGTTC GGTCAATTTC TGTTTTTGAC GTAGATAATA AGCTTTTTGT CACATCCAAC
TACAATTACA ATTCCTCACA ATTAAGACTC CCTCCAGGCG AACCCGTCCC CGATTCTTTG
ATGCTTTCGT ACCGTGGGGA TTCGCTGATC CTACGAATGC CCATTGTCTC TGAATCTAAT
TTATCCAGTG AACAAGCCTC CGGGCAGGGG GAAAGTGACC AGATACTGGG CTATATCGCC
ATTGATTTAG ATTTACAATC AGTGCGCCTG AAACAATATA AAGAAATATT CATTTCAACT
TTGCTACTGC TGTTCTGTAT GTGTGTTGCC ATTTTGTTTG CTTACCGCCT GATGCGAGAT
GTCACCGGCC CTATCCGCAA TATGGTCAAT ACCGTCGACC GTATTCGCCG CGGGCAATTA
GACAGCCGGG TTGAAGGCCA TATGCTCGGG GAGTTGAATA TTCTTAAAAA TGGTATCAAT
TCAATGGCGA TGTCACTCGC GGCCTATCAT GAAGAGATGC AGCAGAATAT TGATCAAGCG
ACATCGGACT TACGCGAAAC ACTCGAACAA ATGGAAATCC AGAATGTGGA ATTGGGGCTG
GCGAAAAAGC GTGCTCAAGA AGCCTCTCGA ATTAAATCGG AGTTCCTAGC CAATATGTCC
CATGAGCTGC GTACACCACT CAATGGGGTG ATTGGTTTTA CCCGACAAAC ACTGAAAACC
TCGCTGACAC CGACACAAAC TGACTATTTA CAAACCATCC AGCGTTCGGC CAACAACCTG
TTATGCATCA TTAACGATGT CCTGGATTTC TCCAAACTGG AAGCCGATAA ACTGATACTT
GAGCATATTC CCTTTTCGCT ACGTGGAACG TTAGATGAAG TCATTATTTT GCTGGCACAT
ACCGCCCATG AAAAAGGGCT AGAGCTGACG TTACATATCA ATAATGACGT GCCAGACCAA
GTGTTAGGCG ATGCCATGCG TTTGCAGCAA ATCGTCACTA ACTTGCTGGG TAATGCGATT
AAATTCACCG AAGAGGGCAA TATTGACATT CTGGTCGTCG TGAAGGCTAT CGCATCACAG
CAAGTGACAT TGATGGTAGA GATCCACGAT ACCGGTATCG GTATTTCTGA ATCCCAGCAA
GCGCAGTTAT TCCAGGCTTT CCGTCAGGCG GATGCCAGTA CCTCTCGACG CCATGGAGGT
ACCGGGCTTG GCCTGGTGAT TACCGAACGG TTAGTGAAAG AAATGGGCGG TAATATCAGT
TTCCAAAGCC AAATGAGTTG CGGTTCAATC TTCAGATTTC ACCTCACATT AGAACTTAAC
GAGAGTATCC CTTACCGCCA ACCTGATATG GCGCATTTAG AGGGGAAACA ACTGGCTTAT
ATTGAGCGTA ATTCTACGGC GGCGAGAGCG ACGATAAATA TACTCAACAC CACGCCATTG
CAGGTGACTC ATCGTCAGTC TTTAGCTCAG TTACCTGAAC AACATTATGA TTTCCTGCTG
GTCGGGGTAC CGATCCCATT TAGAAATAAC ATGGCAATTC ATCAAGATAA ATTGCTAACA
GCCCTAAAAA TTGCCGACCA TGTCATCTTG GCACTACCAA GCCAATCGCA AGTAGAAGCC
GAGCAACTTA AGCAAATCGG AGCCAAAGGT TGCCTGCTGA AACCCATATC GTCTATCAGG
CTTATCCCTT TACTCTTGGC CGAAGACACG CATAGTAAAG TACCATCAGA GGAGCAACCA
CGTAAGCAAC CAAAGTTACC TTTCAGGGTG ATGGCTGTCG ACGATAACCC TGCGAATCTG
AAGCTAATAG GTACCCTGCT TGAAGAGCAA ATTGAGGAAA CGGTACTGTG CGACAGCGGT
GCCATGGCGA TCACCTATGC GCGTGAGCAC ACGCTGGATA TCATTTTAAT GGATATTCAA
ATGCCAGAAA TCGATGGTAT CCGTGCCAGT GAAATTATTC ACCAGATACC GCATCACCAA
GAGACACCAA TCATTGCGGT CACCGCCCAT GCCGTTAAAG GCCAGCAAGA GCAATTGTTA
AGATTGGGTA TGGCAGATTA TCTGGCAAAG CCTATTGATG AAGCACGGCT GCTACAGGTA
CTTTCCCGCT ATCAAAGCGA TAATTCGCCA TTATCTACAG CATCTACAAC ATCTACAACA
TCTACAGCAT CTACAGCAGA AAGCCTGCCA CTTCCCGTGC CTAAAGGTGC TGGGGTCATA
GATTGGGCAC AGGCTGTCAG GCAAGCCGCA AATAAAGAGG ATCTGGCACG GGATCTCTTA
ACCATGTTGC TAGAATTTAT GCCGCAGATT ACCGCCCGTG TGCAGGCGAT TCTGGCAGGG
GCTGACGATG GCGACATTCT GAATTTGGTG CATAAATTCC ATGGCAGTTG CGCCTGTAGC
GGTGTGCCAC GCCTCAGACA ACTGTGCATG ACCATTGAAC TACAGTTGCG CCAGCAGGTT
AATTTGCAGG ATTTAGAACC CGAGTGGCTT GAGTTGCTGG ATGAGATAGA AAATGTCAGC
GAAGCGGCTA AAACCTATTT ACGTACAGAG TGA
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| Protein sequence | MTKYSLRARM MILILAPTLL LGLLLSTSFM VNRYNELQNQ IVSAGTNIIE PLAVASEYGM
SFRNRDTVRQ LINLLHRRHS NIVRSISVFD VDNKLFVTSN YNYNSSQLRL PPGEPVPDSL
MLSYRGDSLI LRMPIVSESN LSSEQASGQG ESDQILGYIA IDLDLQSVRL KQYKEIFIST
LLLLFCMCVA ILFAYRLMRD VTGPIRNMVN TVDRIRRGQL DSRVEGHMLG ELNILKNGIN
SMAMSLAAYH EEMQQNIDQA TSDLRETLEQ MEIQNVELGL AKKRAQEASR IKSEFLANMS
HELRTPLNGV IGFTRQTLKT SLTPTQTDYL QTIQRSANNL LCIINDVLDF SKLEADKLIL
EHIPFSLRGT LDEVIILLAH TAHEKGLELT LHINNDVPDQ VLGDAMRLQQ IVTNLLGNAI
KFTEEGNIDI LVVVKAIASQ QVTLMVEIHD TGIGISESQQ AQLFQAFRQA DASTSRRHGG
TGLGLVITER LVKEMGGNIS FQSQMSCGSI FRFHLTLELN ESIPYRQPDM AHLEGKQLAY
IERNSTAARA TINILNTTPL QVTHRQSLAQ LPEQHYDFLL VGVPIPFRNN MAIHQDKLLT
ALKIADHVIL ALPSQSQVEA EQLKQIGAKG CLLKPISSIR LIPLLLAEDT HSKVPSEEQP
RKQPKLPFRV MAVDDNPANL KLIGTLLEEQ IEETVLCDSG AMAITYAREH TLDIILMDIQ
MPEIDGIRAS EIIHQIPHHQ ETPIIAVTAH AVKGQQEQLL RLGMADYLAK PIDEARLLQV
LSRYQSDNSP LSTASTTSTT STASTAESLP LPVPKGAGVI DWAQAVRQAA NKEDLARDLL
TMLLEFMPQI TARVQAILAG ADDGDILNLV HKFHGSCACS GVPRLRQLCM TIELQLRQQV
NLQDLEPEWL ELLDEIENVS EAAKTYLRTE
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