Gene YpsIP31758_3289 details

Gene Information

• Locus tag: YpsIP31758_3289
• Symbol: rpiB
• ID: 5386800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: +
• Start bp: 3700438
• End bp: 3700893
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640866304
• Product: ribose-5-phosphate isomerase B
• Protein accession: YP_001402246
• Protein GI: 153950679
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 52
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGTCTA TTGCAATCGG CTGTGATGAT GCCGCTATTG AGATGAAAAA CCAGATTGTT 
ATTTTTCTAC AAAGTAAGAA CATCACTGTC GTCGATTACA GCTGCGATCA ACACCAAGAA 
CCGACGATGT ACCCCGATAT TGCCATTCAG GTTGCTCTGG CGATTAAAGC CGGGAAACAT 
GAACGCGGGA TCCTTATTTG TGGAACAGGT ATTGGGATGA GCATCTCTGC CAATAAAGTT 
TTTGGCGTCC GTGCAGCTCA GTGCCATGAT ACTTTTTCTG CCCAACGAGC CAGAAAAAGC 
AACAATGCCC AAATTATCTG TTTAGGCGCT CGCGTTATTG GCCCGGAGTT AGCCAAAACC 
CTGATCGAGG CTTGGTTAGA TGCTGAATTT GACGGAGGGG GATCAACGGA AAAAGTGGAA 
CGGATCCGCT ATTACGAACA GAGCCTGCAT GATTGA 

 

Protein sequence

MLSIAIGCDD AAIEMKNQIV IFLQSKNITV VDYSCDQHQE PTMYPDIAIQ VALAIKAGKH 
ERGILICGTG IGMSISANKV FGVRAAQCHD TFSAQRARKS NNAQIICLGA RVIGPELAKT 
LIEAWLDAEF DGGGSTEKVE RIRYYEQSLH D