Gene YpsIP31758_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3282 
SymbolarsB 
ID5384391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3693312 
End bp3694601 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content51% 
IMG OID640866297 
Productarsenical pump membrane protein 
Protein accessionYP_001402239 
Protein GI153949826 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID[TIGR00935] arsenical pump membrane protein 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTGG CTGGTGCTAT TTTTATCCTG ACTATCGTGT TAGTTATCTG GCAACCCAAA 
GGGTTAGGGA TTGGTTGGAG TGCCATGCTG GGGGCAGGAC TGGCATTACT CACTGGCGTG
GTACATGTGA GTGATATTCC CGTGGTCTGG CAAATTGTCT GGAACGCCAC GGCGACTTTT
ATCGCCATCA TCATCATCAG CCTGTTATTG GATGAGTCGG GGTTCTTTGA ATGGGCAGCC
TTACATGTCG CACGGTGGGG TAATGGCCAT GGTCGCCGCC TGTTTACTTA CATCATCTTA
CTCGGCGCGG CAGTCGCTGC CCTGTTTGCC AATGATGGCG CGGCGCTGAT CCTCACGCCG
ATTGTCATTG CCATGCTATT GGCGCTGGGG TTCGGCCGTG GCGCAACATT AGCCTTTGTG
ATGGCAGCCG GGTTTATTGC CGATACTGCC AGCTTGCCGC TTATCGTGTC GAACCTGGTG
AATATAGTTT CTGCTGACTT CTTTAACCTC GGGTTCACTG AATACGCGGC GGTGATGGTG
CCAGTCAATC TGGTCGCCGT TATCGCCACG CTGGCGATGC TACATCTATT TTTTCGTAAA
GACATTCCGG CGGTTTATGA TTTATCACTG CTGAAAGCCC CGCAAGCGGC TATCCGCGAT
ATGAATACGT TCAAAACCGG CTGGTTGGTC CTTGCCCTAC TGCTGATCGG GTTCTTTGCT
CTGGAACCGC TCGGTGTTCC AGTCAGTTTG GTGGCCGCCG TCGGTGCGCT GATTTTGTTG
GCTGTAGCGA AAAAAGGACA TGCCATCAAT ACGGGAAAAG TGCTACGTGG TGCACCTTGG
CAAATTGTTA TTTTTTCATT AGGGATGTAT CTGGTGGTTT ATGGTCTGCG TAATGCGGGT
CTGACCCACT ATATTTCAGC GTTGCTAAAC CGACTGGGTG AACAGGGGCT GTGGGCGTCA
ACTTTAGGGA CTGGCTTCTT AACCGCGTTT CTCTCTTCCA TTATGAATAA TTTACCCACC
GTTCTGGTAG GGGCACTTTC TATCGAAGGC AGCACGGCAA CCGGGTTAAT TAAAGAGGCG
ATGATTTATG CCAATGTTAT TGGTAGCGAT CTCGGGCCGA AAATCACCCC TATAGGTAGC
CTGGCCACTT TATTGTGGCT GCATGTTTTG TCGCAAAAAA ATATGACCAT CACTTGGGGA
TATTATTTCC GAGTAGGGAT TATCATGACC CTTCCAGTGC TATTGGTGAC GTTGAGCGCG
CTCGCACTAC GATTGTCCGT ATCGATGTAA
 
Protein sequence
MLLAGAIFIL TIVLVIWQPK GLGIGWSAML GAGLALLTGV VHVSDIPVVW QIVWNATATF 
IAIIIISLLL DESGFFEWAA LHVARWGNGH GRRLFTYIIL LGAAVAALFA NDGAALILTP
IVIAMLLALG FGRGATLAFV MAAGFIADTA SLPLIVSNLV NIVSADFFNL GFTEYAAVMV
PVNLVAVIAT LAMLHLFFRK DIPAVYDLSL LKAPQAAIRD MNTFKTGWLV LALLLIGFFA
LEPLGVPVSL VAAVGALILL AVAKKGHAIN TGKVLRGAPW QIVIFSLGMY LVVYGLRNAG
LTHYISALLN RLGEQGLWAS TLGTGFLTAF LSSIMNNLPT VLVGALSIEG STATGLIKEA
MIYANVIGSD LGPKITPIGS LATLLWLHVL SQKNMTITWG YYFRVGIIMT LPVLLVTLSA
LALRLSVSM