Gene YpsIP31758_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3278 
Symbol 
ID5386981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp3689324 
End bp3690703 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content47% 
IMG OID640866293 
Productcytochrome c peroxidase 
Protein accessionYP_001402235 
Protein GI153947570 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATAAGAA GAGGATTAAT TGGTGGCGGT ATATTGGTAA TTGCAGGTTA TCTGGGTATT 
GCTGGCTATC TTTATATGAC AGATAACACA CGTAATAACA CCTTCATCAG CGAGGCAAAA
ACACCCAATC AGCAGGTCAG TAATATTCTT TACCAAAAAG GGTGTGATTA TTGCCATACC
GCGAATGCAT CCCTGCCATT TTATGCCGCT ATCCCCGGCC CTAAACAACT GATGGACTAT
GACATTCGAC AAGGTAACCA GCATTTCTCA TTGGAGCCAA CACTATTAGC ATTAAAAGAA
AATCGTGCCG TTCCTGAAGC AGATTTAGCC AAAATAGAAT CGGCTATTGC TCGCGATCAA
ATGCCACCTC AACGCTTTAG CGCATTACAT TGGTCCTCCA GCATCAACGC TGAGGAGCGA
AACCAGATCC TTGATTGGGT CAAAATACAA CGGACGACAT ACTTCCCTTC CAATAGCCAC
AGCGAAATGC AGCACTTAGC ACTACAGCCG ATCCCCGATG CCTTGCTGGT CGACAACCAA
AAAGTGGCAC TAGGTTCCCG CCTGTTCCAT GACCCCAGAT TATCCGGTGA TAACTCTATT
TCCTGTGCCA GTTGCCATCT GTTGAACAAA GGAGGCGTTG ATAATCTGGC GACCTCAACG
GGTGTCGATG GACAAAAAGG TGGGATCAAC GCGCCTACGG TATTTAATGC CGTATTTAAC
GTGGAGCAGT TTTGGGATGG CCGTGCCGTT GATTTGCAGC AACAAGCCGG TGGACCACCA
CTTAACCCAG TAGAAATGGC CTCGACCTCT TGGGAAGATA TAATTGCTAA ATTGCAACAA
GACCCACAGT TGACCCAGGA CTTTGCCCAA GTGTATCCGC AAGGCTATTC TGAAGACACG
ATCACCGATG CAATCGCTGA ATTTGAGAAA ACCCTGACCA CCCCCAACAG CCCTTTCGAC
CACTATCTGA AAGGTGAAAC ACAGGCATTA ACGACTAGCC AGCAAAAAGG CTTGGCGCTA
TTCCAGCAAA ATAAATGTGA TACCTGCCAC GTCGGTAAAA ATATTGGTGG GCAGTCCTAT
GAGTTCTTGG GGCTAAAAAG TGACTATTTC GCTGATCGCC AAAAAGAGCA AACTACCGAT
GACCTCGGGC GTTTCAACGT CACCAACGAT CCACGCGATA TGCACCGCTT TAAAACACCG
AGCTTGCGTA ATATTGCCTT AACAGCCCCT TATTTTCACG ATGCACAAGC TAAAGATTTA
CATCAGGCGG TTGAGCTAAT GCTCAAATAT CAGGTAGGGA CCCAACTACC AGAACAGGAT
ATCAACGATA TCGTGGCCTT CCTGGAAAGT TTGACCGGGG AATATATTCC TCATTCCTGA
 
Protein sequence
MIRRGLIGGG ILVIAGYLGI AGYLYMTDNT RNNTFISEAK TPNQQVSNIL YQKGCDYCHT 
ANASLPFYAA IPGPKQLMDY DIRQGNQHFS LEPTLLALKE NRAVPEADLA KIESAIARDQ
MPPQRFSALH WSSSINAEER NQILDWVKIQ RTTYFPSNSH SEMQHLALQP IPDALLVDNQ
KVALGSRLFH DPRLSGDNSI SCASCHLLNK GGVDNLATST GVDGQKGGIN APTVFNAVFN
VEQFWDGRAV DLQQQAGGPP LNPVEMASTS WEDIIAKLQQ DPQLTQDFAQ VYPQGYSEDT
ITDAIAEFEK TLTTPNSPFD HYLKGETQAL TTSQQKGLAL FQQNKCDTCH VGKNIGGQSY
EFLGLKSDYF ADRQKEQTTD DLGRFNVTND PRDMHRFKTP SLRNIALTAP YFHDAQAKDL
HQAVELMLKY QVGTQLPEQD INDIVAFLES LTGEYIPHS