Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3275 |
Symbol | |
ID | 5387484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3684851 |
End bp | 3686134 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640866290 |
Product | putative enterotoxin |
Protein accession | YP_001402232 |
Protein GI | 153948798 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 57 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATTG ATCACTACAG CTTGCCCGTT TACGACAAAA ACAATGGTGA TAGCACCCTG AAGGAAACCG AATTATTTAA AGAAGTCCCT TATTTATCTG CTCGGTTAGG GGAGCAGGCT TATGAGTATA GTGGTGGTGA CATCAGTAAT TATCATTTAT CTATTCAATA TATCATGGAC GTTCTGGCTG ATCAGGCTAA GGGTAAAGTG GATTTAAGCC ATTTTTCCAG TGAGGAAACG CTCTCTTCTC ATGTTTCTCT TGAGAAAAAT GAGCATAACT ATCATTGCTT TAATCAGCAT GCCAGTACTG TTTATCATAT TAATAATAAT GATTTTGGCC GCACGCTGGT TGATCTTTTT GAGCAGATGA ACAATTCGGG TGAAAATGTT CGAGCATTAA AAATTGATAG TTCTCAACAT TCAATGGCTG CGCGTCTTTA TATTAAAAAC ACGGAGCAAG GGCAGCGTTT CGTTGTTAAT TTTTATGACC CTAATATCAC GGATAAAACT GTGCGTTGTG AGGTGGATGA CGCATTAAAA TTGAATGGCT ACTCATTAAG AAATTTCATT AGTAACCAGA CTTACTTATC CAGCTATGTT GATGCAGAGA TATCATCAAT TATTGTTTGT GATCAAGCCG ATATCCATGA TCAACATAAG GTGAAAGAGA ACCGAGCGTT AACGCCATTA TCACAGAGTT CACCTCTTCC TTTATCGGCA GCACGATTGG ATCTGTTGTT AACAGATAAT TTTGCTGTGG GTATACAAAA AATGGCAGAA GAAGTTAAGA ATCTATCAGA ATCCGAGCGT AAGGTGTTTT TTAATCAGTT ATTACAACCG AGGGCGAAGG ATGACGTCCC TGGGTTGCAA TGTGCTTTCA TTCATCAGTG TTTTGAGGCG CTGGAAGCCT ACGGTGAATT GTTGGCGCTT GCACCGCCAG AACAACGAGC AGATTTATTA ACAGCAGAAA GCGAAAATGG TTATATCACT ATGCCTTGGG TCATATCATC AGGGAATCCT GAGCTGGTGG ATGCATTCTT TACGTTGTCA CGACTCCTTC CCTTGAACGA TATGAATACG CTTATAGAGC AATACGTTAG TCTCATAGGA GAAGGTTCTG AGTTGTTTGT AGAATTAGCT GAAATATATG AACAACAATC TGAGTTATTT ACAAAAGAAG CTAAATTACA TGCACAACAA TCAGAAGTCG TTACACCATC GTCTGATGAG GAAGCTCCCG ATGCACTTAC ATTGGTCAGT GATTCGGTGA TTGAGCAGCG CTAA
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Protein sequence | MHIDHYSLPV YDKNNGDSTL KETELFKEVP YLSARLGEQA YEYSGGDISN YHLSIQYIMD VLADQAKGKV DLSHFSSEET LSSHVSLEKN EHNYHCFNQH ASTVYHINNN DFGRTLVDLF EQMNNSGENV RALKIDSSQH SMAARLYIKN TEQGQRFVVN FYDPNITDKT VRCEVDDALK LNGYSLRNFI SNQTYLSSYV DAEISSIIVC DQADIHDQHK VKENRALTPL SQSSPLPLSA ARLDLLLTDN FAVGIQKMAE EVKNLSESER KVFFNQLLQP RAKDDVPGLQ CAFIHQCFEA LEAYGELLAL APPEQRADLL TAESENGYIT MPWVISSGNP ELVDAFFTLS RLLPLNDMNT LIEQYVSLIG EGSELFVELA EIYEQQSELF TKEAKLHAQQ SEVVTPSSDE EAPDALTLVS DSVIEQR
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