| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3269 |
|---|
| Symbol | |
|---|
| ID | 5384922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3678987 |
|---|
| End bp | 3679868 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640866284 |
|---|
| Product | putative L-xylulose 5-phosphate 3-epimerase |
|---|
| Protein accession | YP_001402226 |
|---|
| Protein GI | 153947045 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3623] Putative L-xylulose-5-phosphate 3-epimerase |
|---|
| TIGRFAM ID | [TIGR00542] hexulose-6-phosphate isomerase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTC ACCCACTAGG AATATACGAA AAAGCCCTAC CTGCGGGCAC CAGTTGGGTC
GAAAAGCTGG CGGTAGCAAA ATCCTGCGGC TTCGACTTTG TTGAAATGTC CGTTGATGAG
AGTGATGAGC GGCTGGCTCG TCTGGATTGG AGCCGCGAGG AGCGTATGGC GGTGATCAGT
GCCATTCAAC AGACCGGGGT GCGCATTCCA ACCCTGTGCC TCTCGGCTCA CCGCCGCTAT
CCATTCGGTA GCCGCGATGC CGCCACGCGG GAGCAAGCGC GTACGGTCAT GTTACAGGCT
ATCCGGCTGG CGCAGGATCT TGGGATCCGT ACCATTCAAC TGGCAGGATA CGATGTGTAC
TACGAACCGC AGGATAGTGA AACGATCGCA CGTTTTGAAG CGGGGATCGC CTGGGCGGTG
AAGCAAGCCG CGGCAGCGCA AGTGATGTGT GCGGTCGAGA TCATGGACAC CCAGTTTATG
AACTCCATCA GCAAGTGGAA GGCGCTGGAC AACAAGATTG GCTCTCCGTG GTTTACCGTC
TACCCCGATA TCGGCAACCT CACGGCCTGG GGCAATGAAG TCAACAGTGA ATTGGCAAAA
GGGATTGACC GCATTGCAGC GATCCATCTG AAAGATACCT TTGCCGTCAC CGCTGACTCC
CCCGGCCAAT TTCGTGATGT GCCGTTTGGT GAAGGCTGTG TCGATTTCGT TAATCTGTTT
AAAACCCTGC GCCGCCTGAA CTATCGCGGA ACCTTCCTGA TAGAGATGTG GACAGAAAAA
GCGGACGAGC CTTTGCTGGA AATTATCCAT GCCCGCCACT GGATCGAAGA CAAAATGCGG
TTGGCTGGCT GGGATAACGA ATCCGGCCAG TTAACCCGCT AA
|
|---|
| Protein sequence | MRIHPLGIYE KALPAGTSWV EKLAVAKSCG FDFVEMSVDE SDERLARLDW SREERMAVIS
AIQQTGVRIP TLCLSAHRRY PFGSRDAATR EQARTVMLQA IRLAQDLGIR TIQLAGYDVY
YEPQDSETIA RFEAGIAWAV KQAAAAQVMC AVEIMDTQFM NSISKWKALD NKIGSPWFTV
YPDIGNLTAW GNEVNSELAK GIDRIAAIHL KDTFAVTADS PGQFRDVPFG EGCVDFVNLF
KTLRRLNYRG TFLIEMWTEK ADEPLLEIIH ARHWIEDKMR LAGWDNESGQ LTR
|
|---|
| |