Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3268 |
Symbol | |
ID | 5386440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3677708 |
End bp | 3678745 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640866283 |
Product | carbohydrate ABC transporter permease |
Protein accession | YP_001402225 |
Protein GI | 153948518 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA ACCGTTTTCT ACCTATCGAC GGCACCATTT CCGGCTTGTT AGGGATTTTT TGTCTGGCAA CACTGGCCTT CAGTCTGGCG ATGCCTGGCC GTTTCTTTAC CGAGAACACC TTTCTGAGTA TTGCGTTTCA GTTGCCAGAG TTGGGGTTAC TGACCTTCGC CATGTTTGTA CCGATGCTCA GCGGCGGATT AAACCTGTCT ATTATTGGCA CCGCAAACCT GACCAGTCTG TTTATGGCCT GGCTGCTTAT CCAATATGTT CCCGCAGATG CCAGTACCAC GACACAACTG ATGTGGCTAC TGCTGGCACT GATGGGGGCA GCGCTGATTG CCGTGGTTAT CGGCACACTG ACTGGGTTGA TGATCGCCCG TATTGGCGCA CATCCCATTT TAGTGACGTT GGGCAGTATG ACCATTATCA GCGGCATCGG TGTTTATCTG ACCAAAGGCG CGGCGCTCAG TGGCATGCCA CCGATTGTTC GCAGTATGGG TTCCGAAGTG GTGATGGGCG TGCCGATCCC GATGATTATT TTCATCGTGG CCTCACTGCT GCTGGCGCTG TTCTTAGGTA AAACTCGCCT GGGCAAAACG ATTTATATGT GCGGCAGCAA TATTAACGCC ACGTGGTTCA GCGGTATTCG TACTGACCGG GTCATGATGG CTATCTACAC CATGTCCAGT CTGCTGTGTG TACTGGCGGG CCTGATCATG ATGTCGCGCT TCAACTCTGC GCGTATGGGC TACGGCGACT CTTATTTATT GCTTACCGTG TTGGCTATCG TCTTGGGCGG AACCAACCCG TTCGGTGGTG TGGGTAAAGT GAGCCATGTG TTCTGCGCTC TGCTGGTATT ACAAGTGATC GCCACGGGGC TGAGCCTACT CGGCGTTAGC CTGCACGTTA ATCTGGCGGT CTGGGGTATC ACCCTGATCT TCGCCCTGGC CTTTAAGTTT TTTAAAGAGA AATGGAAAGC CAAACGTGCC ATGAGGCAGA ACCGTTTGAA TTATCTAAAA AAATGTCACG CCAAGTGA
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Protein sequence | MKKNRFLPID GTISGLLGIF CLATLAFSLA MPGRFFTENT FLSIAFQLPE LGLLTFAMFV PMLSGGLNLS IIGTANLTSL FMAWLLIQYV PADASTTTQL MWLLLALMGA ALIAVVIGTL TGLMIARIGA HPILVTLGSM TIISGIGVYL TKGAALSGMP PIVRSMGSEV VMGVPIPMII FIVASLLLAL FLGKTRLGKT IYMCGSNINA TWFSGIRTDR VMMAIYTMSS LLCVLAGLIM MSRFNSARMG YGDSYLLLTV LAIVLGGTNP FGGVGKVSHV FCALLVLQVI ATGLSLLGVS LHVNLAVWGI TLIFALAFKF FKEKWKAKRA MRQNRLNYLK KCHAK
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