| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3265 |
|---|
| Symbol | |
|---|
| ID | 5384526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3674043 |
|---|
| End bp | 3675050 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640866280 |
|---|
| Product | carbohydrate ABC transporter periplasmic-binding protein |
|---|
| Protein accession | YP_001402222 |
|---|
| Protein GI | 153947885 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 59 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA AGTTAATATT ACCTTGCTTA ATAACGACCT TGCTGGCTTC CCATGCGGCG
TGGTCTGCTG ACAGCAACAC ACCACAAAAG GCGAATAAGC CGTTTACCCT GGGTGTCGTG
GTTAAAGTGG GGGGTATTCC TTGGTTCAAT GTAATGGAGC AAGGTATCAA AGCGGAAGGT
CAGGCATTGG GGGTTAACGC TTGGCAGGTG GGGCCAACGA CCGCAGATCC CGCTGAGCAA
GTGCGGGCTA TTGAAGACTT AATTGCCAAA AAAGTCGATG TCATCGGGGT GGTTCCTAAT
GATGCCAAAG TGTTGGAGCC CGTACTGAAG CGGGCGCAAG AAGCCGGTAT TAAGGTTATC
ACGCACGAGT CACCGGGTCA GATCAATGCC GACTGGGATT TTGAATTGCT CGATACCCAG
AGCATGGGTG CTAACCATAT GAAAGATATG GCGCAGTGTA TGGGTGAAGA AGGCAAATAC
GCCATGTTTG TTGGCAGCCT GACCGTGCCA CTGGTCAATG AGTGGGCAGA TGCCGCCATT
GCTTATCAAA AAGCCAATTA CCCGAAAATG GTGCTGGTTG AAGACCGCTT CGGTGTCGCC
GAGTCTGTCG ATGACTCCAT GCGTACTGCC AATGATTTGT TATCTAAACA TAAAGATCTG
AAAGGCATTA TGTCTTTTGG TTCACAAGGC CCTATTGGGG CTGGCCGGGC TATTGATAAG
CGTAAAAAGA ACGATACCAC CTGTGTCTTC GGCACCTTCA CACCAGGCCA GGGCATTAAG
TTGCTGGAAA AAGGCGCCAT TGATGGCGGT TACATCTCCA ACCCCATGGT CGCAGGTAAA
GTCTTCGTCC AGGTCGCTAC CGCCATGATG AATGGTGAGC CTATCAAAGA TGGCGTCAAA
CTGGGTGATA TGGGCGAAAT CAAAACCCAA GGCAATACCA TCCTCAGTGA TAACCCTGAA
AAGCTGGATA TCGAAAATAC CAAACGTCTG GTGAAGCTCG GTTTATAA
|
|---|
| Protein sequence | MMRKLILPCL ITTLLASHAA WSADSNTPQK ANKPFTLGVV VKVGGIPWFN VMEQGIKAEG
QALGVNAWQV GPTTADPAEQ VRAIEDLIAK KVDVIGVVPN DAKVLEPVLK RAQEAGIKVI
THESPGQINA DWDFELLDTQ SMGANHMKDM AQCMGEEGKY AMFVGSLTVP LVNEWADAAI
AYQKANYPKM VLVEDRFGVA ESVDDSMRTA NDLLSKHKDL KGIMSFGSQG PIGAGRAIDK
RKKNDTTCVF GTFTPGQGIK LLEKGAIDGG YISNPMVAGK VFVQVATAMM NGEPIKDGVK
LGDMGEIKTQ GNTILSDNPE KLDIENTKRL VKLGL
|
|---|
| |