Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3259 |
Symbol | dmsC |
ID | 5387457 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3667005 |
End bp | 3667865 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640866274 |
Product | anaerobic dimethyl sulfoxide reductase, C subunit |
Protein accession | YP_001402216 |
Protein GI | 153948642 |
COG category | [R] General function prediction only |
COG ID | [COG3302] DMSO reductase anchor subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTCAG GATGGCATGA ATGGCCACTA ATGGTCTTTA CCGTACTGGG GCAGTGTGTG GTCGGGGGCT TGATTGTTCT CGGTCTGGCA CTGATATTCG GTGGTTTGAG TCGCGGGCAA CAACAGCGGG TTCACCGCAG CATGTTTGTG CTTTGGGTGC TGATGGCACT GGCTTTTATC GCCTCTACAC TGCATTTAGG TTCGCCAATG CGGGCGTTCA ACTCATTGAA TCGGATCGGT GAATCTGCAC TGAGTAATGA GATTGCCGCC GGTTCGTTGT TCTTTGCTGT GGCCGGTTTT TACTGGTTGT TGGCGGTGTT GGATAAAATG CCTGCCGCGC TTGGCAAGAT CTGGCTGGTG GTGGCAATGG TGCTGGGCGT GATGTTTGTC TACGCCATGT GCCGGGTCTA CTCCATTAAT ACGGTACCGA CGTGGGACAG TATTTATACC CCGCTGGGCT TTGTCCTGAC CACGTTTATC GGTGGCCCGC TATTGGGTTA TCTGTTGCTG CAATTGGCTG ATGTTAATGG GCGGGCGATG TTACAACTGC CAATGATCAG CGTATTGGCA CTGATCATCA GTGTGGCCAG TATCATTATG CAGGCGGCCA GTTTGCCGCT TATTTATAGC TCGGTACAGC AAGCTTCAGC GCTGATCCCC GACTATGGCT CATTGATGGT ATGGCGGTTA GTGCTGCTGG TGTTGGGGCT TGGCTGCTGG ATTTGCCCGT TGATCAGAGG CCGTCGCCCG ATGACGCTGG TGATGGTCTT GGGCACGTTA CTGGTTATTG CCGGTGAGTT GATTGGCCGT GGGGTGTTCT ACGGGTTACA TATGACGGTC GGTATGGCGG TTGGGGGCTA A
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Protein sequence | MGSGWHEWPL MVFTVLGQCV VGGLIVLGLA LIFGGLSRGQ QQRVHRSMFV LWVLMALAFI ASTLHLGSPM RAFNSLNRIG ESALSNEIAA GSLFFAVAGF YWLLAVLDKM PAALGKIWLV VAMVLGVMFV YAMCRVYSIN TVPTWDSIYT PLGFVLTTFI GGPLLGYLLL QLADVNGRAM LQLPMISVLA LIISVASIIM QAASLPLIYS SVQQASALIP DYGSLMVWRL VLLVLGLGCW ICPLIRGRRP MTLVMVLGTL LVIAGELIGR GVFYGLHMTV GMAVGG
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