| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3220 |
|---|
| Symbol | aroF |
|---|
| ID | 5386830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 3627150 |
|---|
| End bp | 3628226 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640866229 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_001402177 |
|---|
| Protein GI | 153950605 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCATGC AAAAAGACTC GCTCAATAAC GTCCATATCA GTGCCGAACA AATCCTGATA
ACCCCGGAAG AACTGAAAAA TCAGTTTCCA CTGAGCGAAA ATGATCAGTA TTCGATAGAG
CGCGCACGTA AAACCATTGC TGACATTATT CAGGGGCGAG ATCCGCGTCT GTTGGTCGTT
TGTGGGCCCT GTTCAATTCA TGATGTGGAT GCGGCACTGG ATTACGCGCG TCGTTTGAAA
AAACTCTCTG TGGAATTGGA TGACAGCTTA TATATCGTTA TGCGTGTCTA TTTTGAGAAG
CCAAGAACTA CCGTGGGTTG GAAAGGCCTG ATCAATGACC CTGCAATGGA TGGTTCATTT
GATGTAGAGG CAGGTTTACA CATTGCCCGT CGTTTATTGC TGGATTTAGT GGGCATGGGG
TTGCCGTTAG CGACTGAAGC TCTGGATCCT AATAGCCCAC AATATTTAGG TGACCTGTTC
AGTTGGTCGG CCATTGGTGC CCGTACAACG GAGTCACAGA CCCACCGTGA AATGGCATCA
GGCTTGTCTA TGCCGGTTGG ATTTAAAAAT GGCACTGACG GTAGCCTAGG CACGGCAATC
AATGCAATGC GCGCCGCTGC CATGCCACAT CGCTTTATGG GGATCAATCA GTCGGGCCAG
GTCTGCCTGT TACAAACTCA GGGTAACCCA CACGGCCATG TCATTCTACG GGGAGGTAAA
ACACCAAACT ACAGTGCACA AGATGTCGCT CAGTGTGAAA AACAGATGCA GGATGCGGGA
CTCATCCCAT CCTTAATGAT AGATTGCAGT CACGGTAATT CAAATAAAGA CTACCGCCGT
CAGGTTGCGG TGGCTGAATC TGTGGTTGAA CAGATCAAGG CGGGCAATCG TTCAATTACA
GGTGTGATGC TGGAAAGCCA CATCCACGAA GGAAATCAGT CATCTGAACA GCCACGTGCT
GATATGCGCT ACGGTGTTTC TGTGACTGAC GCCTGTATTA ACTGGGAAAG CACTGAAACC
CTGTTACGTG GTATGCGCCA AGAATTGCTT GCAGCACTGA CGGCACGGAC TGCATGA
|
|---|
| Protein sequence | MIMQKDSLNN VHISAEQILI TPEELKNQFP LSENDQYSIE RARKTIADII QGRDPRLLVV
CGPCSIHDVD AALDYARRLK KLSVELDDSL YIVMRVYFEK PRTTVGWKGL INDPAMDGSF
DVEAGLHIAR RLLLDLVGMG LPLATEALDP NSPQYLGDLF SWSAIGARTT ESQTHREMAS
GLSMPVGFKN GTDGSLGTAI NAMRAAAMPH RFMGINQSGQ VCLLQTQGNP HGHVILRGGK
TPNYSAQDVA QCEKQMQDAG LIPSLMIDCS HGNSNKDYRR QVAVAESVVE QIKAGNRSIT
GVMLESHIHE GNQSSEQPRA DMRYGVSVTD ACINWESTET LLRGMRQELL AALTARTA
|
|---|
| |