Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3216 |
Symbol | |
ID | 5386289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 3624030 |
End bp | 3624392 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640866225 |
Product | ribosomal subunit interface protein |
Protein accession | YP_001402173 |
Protein GI | 153948353 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.14131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTTA ATATTACCAG CAAGCAAATG GATATTACCC CGGCAATTCG TAAACACGTT GAGGACCGTC TCACCAAACT GGATAAATGG CAGGCCCAGT TAATAAACCC ACACATTGTA CTGTCTAAAG AGCCACAAGG TTTTGTTGCC GATGCCTCTA TCAGTACACC AATGGGTCCC TTGGTCGCCA GCGCCAAGCA TGATGATATG TATGCTGCCA TTAATGAACT GATCACCAAA CTAGAACGCC AATTAAATAA AGTTCAACAC AAAGGTGAAG CTCGTCGTGC GGCAAGCAGC GTTAAAGACG CTAATTTGGA GTCTGTAGAT GAAGAGGAAA CAGAATCCGA ACCGGAACAA TAG
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Protein sequence | MTVNITSKQM DITPAIRKHV EDRLTKLDKW QAQLINPHIV LSKEPQGFVA DASISTPMGP LVASAKHDDM YAAINELITK LERQLNKVQH KGEARRAASS VKDANLESVD EEETESEPEQ
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