| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3194 |
|---|
| Symbol | |
|---|
| ID | 5388208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 3596399 |
|---|
| End bp | 3597796 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640866201 |
|---|
| Product | amidase |
|---|
| Protein accession | YP_001402154 |
|---|
| Protein GI | 153948867 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 54 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTG CCTCATCACT CACTATCAGC GAGATCCAAC AAGCCCTGCA CAAGGGCGAA
TTATCCGCAC AAGCGATCGC ACAGCAGACG TTGGACGCCA TTACCGTCGC CAATCCGCTC
ATCAACGCTT ATACCCATAT CACCGCTGAC CGTATGCTTA GCGAAGCTTG TCGGCTAGAT
ACGCTACGCG CCAAAGGCCA GCCGCTGCCA GCACTGGCGG CAGTCCCTTA TGCGGTCAAG
AATCTGTTCG ATGTTGCCGG AGAAACAACC CTATCAGGTG CCAGCTTATT TTGTGATCAA
GCCCCCGCCA AACAGGATGC CTGGGCCATT TCATGCCTGA GCCGCCAAGG AGCCATGCTC
TCCGGCATGT TAAATATGGA TGCCTATGCT TACGGTTTTA CTACCGAGAA CAGCCATTAT
GGTGCCACCC ATAATCCACA CGATCTGAAC CGCATTGCAG GGGGATCTTC TGGCGGATCT
GCGGCAGCGG TCGCCGCAGG GCTCGTGCAC TTTTCTCTCG GCAGTGATAC TAACGGTTCG
ATCCGGGTTC CCTCCTCACT GTGTGGTATT TTTGGGCTGA AACCAACCTT TGGCCGCCTG
TCACGCCGCG GCACCCACCC ATTTGTCGCC AGTCTGGACC ATATCGGCCC AATGGCACGC
TGTACGCAAG ATTTGGCGGT GGTTTATGAC GTGATGCAAG GCATCGATAC TCAGGATAAT
TTTCAAGCCG ATCAACCCGT CACGCCGTGC CAAAATTTAC TGACGCGTGG TCAGCAAGGG
TTAAGAAGCG CGGTGCTGGG CGGTTACTTT CATCAATGGA GTGATGATGA CGCCAAAGCC
GCAGTGCTGG CGGTCGCAAA GGCGCTTGAG GCTAACGCGG AGGTCGAGAT GCCGCAGAGT
GATTTAGCCC GGTCAGCGGC ATTTATTATC AGTGCCAGCG AGGGCGGCAA TCAATATCTG
CCCGCCTTGA GGAAATCACC TCAACGTTTT GAACCCCTAT CACGGGAGCG GTTATTAGCC
GGAGCCATGC TACCGGCAAC TTGGTACGTA CAGGCCCAGC GTTTCCGTCA TCATTTTCGC
CAACACATTT TGCCGCTGTT CGAGCACTGG GATATTTTGA TTGCCCCAGC AACGCCATGC
AGTGCCACGC TTATCGGCCA GGACACGATG AGGATTAATG ATATGGACCT ACCGATCCGC
GCCAGTATGG GCATATTAAC CCAGCCAATC TCCTTCCTGG GTCTGCCAGT CGTGAGCGTA
CCCTTGAAAA CCACCCGCGG CTTACCAATT GGCATTCAGT TGATTGCCCC ACCATGGCGA
GAAGATTTAT GCCTGCGCGC GGCTTATGCG CTGGAGCAAC AAGGGTTGGT CAGCGCGCCG
GTGAGTACTG TTATTTGA
|
|---|
| Protein sequence | MKPASSLTIS EIQQALHKGE LSAQAIAQQT LDAITVANPL INAYTHITAD RMLSEACRLD
TLRAKGQPLP ALAAVPYAVK NLFDVAGETT LSGASLFCDQ APAKQDAWAI SCLSRQGAML
SGMLNMDAYA YGFTTENSHY GATHNPHDLN RIAGGSSGGS AAAVAAGLVH FSLGSDTNGS
IRVPSSLCGI FGLKPTFGRL SRRGTHPFVA SLDHIGPMAR CTQDLAVVYD VMQGIDTQDN
FQADQPVTPC QNLLTRGQQG LRSAVLGGYF HQWSDDDAKA AVLAVAKALE ANAEVEMPQS
DLARSAAFII SASEGGNQYL PALRKSPQRF EPLSRERLLA GAMLPATWYV QAQRFRHHFR
QHILPLFEHW DILIAPATPC SATLIGQDTM RINDMDLPIR ASMGILTQPI SFLGLPVVSV
PLKTTRGLPI GIQLIAPPWR EDLCLRAAYA LEQQGLVSAP VSTVI
|
|---|
| |