| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3188 |
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| Symbol | |
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| ID | 5386771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3592585 |
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| End bp | 3593238 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866195 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | YP_001402148 |
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| Protein GI | 153949446 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 61 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATTTA CTGACTGGGA TATCATCCGC AACCTGCTAT TGGCGGCCCG CTGGACGCTG
TTACTGTCAC TCACGGCCTT CTTCGGTGGC ACGTTGGTGA CATTACCGCT AATGCTGATG
CGGTTGAGCC ACTGGCGTTG GGCGGCGCGC TTTGTCCGTT TATATACCGA GCTGTTCCAA
GGAACCCCGT TATTGATGCA GCTATTTTTG GCCTTTTTCG GTCTGGCGCT GTTTGGCATC
GATGTTAGCC CGTGGACAGC AGCGGCCATG GCACTCACCT TATTCACCAG TGCATTTTTG
GTGGATATCT GGTGCGGCAG TATCGCCGCT TTGCCGAAAG GCCAGTGGGA AGCATCACGT
TGCTTGGGGT TGAGTTTTCA CCAAACGCTC TTTCGGGTGA TTGCCCCACA AGCGATGCGT
ATCGCGATTG CGCCAACCGT AGGGTTTTCG GTGCAGGTTA TCAAAGGCAC GGCGCTGGCC
TCCATCATTG GTTTTGTCGA GCTAACCAAA GCGGGCACTA TGCTGAACAA TGTCACTTAT
CAGCCATTTA AAGTCTTTGG GCTGGTCGCG CTGGGCTATT TCCTGATGTG TTATCCCCTG
TCGCGTTATA GCCATTATCT GGAGAAGAAA TTCCATGCCA TTGATCACCA TTAA
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| Protein sequence | MTFTDWDIIR NLLLAARWTL LLSLTAFFGG TLVTLPLMLM RLSHWRWAAR FVRLYTELFQ
GTPLLMQLFL AFFGLALFGI DVSPWTAAAM ALTLFTSAFL VDIWCGSIAA LPKGQWEASR
CLGLSFHQTL FRVIAPQAMR IAIAPTVGFS VQVIKGTALA SIIGFVELTK AGTMLNNVTY
QPFKVFGLVA LGYFLMCYPL SRYSHYLEKK FHAIDHH
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