Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3182 |
Symbol | |
ID | 5385558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 3586361 |
End bp | 3587029 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640866189 |
Product | methylthioribulose-1-phosphate dehydratase |
Protein accession | YP_001402142 |
Protein GI | 153949706 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAA ATAGACAACT TGGCGCGCTG TTAGCCGCCT GCCACTGGAT CGGCGAAAAG GGCTGGTGCC CGGCGACTGG CGGTAATATG TCCCTGAGGC TGGATTTGGC CCACTGTTTA ATCACTGAAT CTGGTAAAGA TAAAGGCAGC CTGGCCGCAG AAGATTTCCT GCTGGTAGAA ACCGCCAATA ACCATGTGCC GAGTGGCCGC ACGCCGTCGG CAGAGACCGG CCTGCATACC TTGCTGTATC GTCTGTATCC TGAAATCCAG GCGGTGCTAC ACACACACTC GGTGAATGCC ACGGTGCTGT CACGGGTTGA GCGCAGTAAT GCGTTAGTGT TGCAAGGCTA TGAGATGCAA AAGTCGTTGT CAGGTCAGCG AAGCCATCTG GACGCGGTGG TGATCCCCAT TTTTGATAAC GACCAGGATA TTCCTGCGTT GGCGCAGCGG GTGGCGGCTT ATGCTGATAA CCGCCCGCTA CAGTATGGAT TTTTGGTGCG TGGTCATGGT TTGTACTGTT GGGGTAATAG CGTGGTTGAA GCCCGTCGCC ATCTGGAAGG GCTGGAGTTT TTGTTCCAGT GCGAGCTACA ACGCCGTTTA TTTGATGTGA ATTCTAACGT TGATGTAAAA CCTAACGTTG ACGTAAATCC TAACGTGGAG GCCAAATGA
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Protein sequence | MTENRQLGAL LAACHWIGEK GWCPATGGNM SLRLDLAHCL ITESGKDKGS LAAEDFLLVE TANNHVPSGR TPSAETGLHT LLYRLYPEIQ AVLHTHSVNA TVLSRVERSN ALVLQGYEMQ KSLSGQRSHL DAVVIPIFDN DQDIPALAQR VAAYADNRPL QYGFLVRGHG LYCWGNSVVE ARRHLEGLEF LFQCELQRRL FDVNSNVDVK PNVDVNPNVE AK
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