| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3171 |
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| Symbol | fadE |
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| ID | 5385978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 3568365 |
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| End bp | 3570812 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866178 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_001402131 |
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| Protein GI | 153947518 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTTC TTAGCATTGT TGCCTTACTG GTTCTTATTA GTGTGTTGTT CTATCACCGG
GTGAACCTTT ATCTCAGCAG TTTAATTCTT CTGGTTTACA CCGCCGCTTT GGGCGCCTCG
CAGTTATGGT CATTCTGGGT ATTATTACCA ATGGTGATTA TTCTGTTGCC ACTGATCCTA
ACGCCGCTGC GCAAGTCACT GTTCTCTGCG CCAGCATTAC GGATTTTCCG TAGCGTCATG
CCTGCTATGT CACGTACAGA AAAAGAAGCG ATTGATGCAG GGACTACCTG GTGGGAAGGT
GATTTGTTCC GAGGGGCTCC TGACTGGAAA AAATTACACA ACTATCCAAA ACCGCAATTA
ACCGCCGAAG AGCAAGCCTT TATCGATGGG CCGGTTGAAG AAGCCTGTCG TATGGCTAAT
GACTTCCAGA TAACCCATGA ACTGGCTGAT TTGCCACCAG AATTATGGGA TTACCTGAAA
GAAAAACGCT TCTTCGCGAT GATCATTAAG AAAGAATATG GGGGTCTTGA ATTTTCTGCT
TATGCTCAGG CCCGCGTGTT ACAGAAACTA GCCGGGGTCT CAGGTATTCT GGCCATCACC
GTTGGCGTAC CAAACTCCCT TGGCCCAGGT GAATTATTGC AACATTACGG CACTGAAGAG
CAAAAAAATC ATTATCTGCC AAGATTAGCC CGGGGTGACG AGATCCCTTG CTTTGCACTA
ACCAGCCCGG AAGCCGGTTC TGATGCCGGT GCGATCCCTG ATGTTGGTAT TGTCTGTATG
GGCGAGTGGC AAGGTAAACA GGTTCTCGGC ATGCGCCTAA CCTGGAACAA GCGCTATATT
ACGCTGGCCC CCATCGCGAC GGTTCTGGGG CTGGCCTTCA AATTATCGGA CCCCGAACAC
TTACTGGGCG ATACGGTAGA CTTGGGGATT ACCTGTGCAC TGATCCCAAC CCATACACCA
GGAGTAGAGA TCGGGCATCG TCACTTCCCG CTCAATATAC CGTTCCAAAA TGGCCCTACC
CGCGGTAACG ATATTTTTGT CCCCATTGAT TACATCATCG GCGGCCCTCA AATGGCCGGT
CAAGGCTGGC GGATGCTGGT GGAATGCCTG TCTGTGGGGC GTGGAATCAC CTTGCCTTCC
AATGCCACTG GTAGCCTGAA AAGTGTGGCG ATGGGGATCG GTGCTTACGC TTATATTCGC
CGTCAATTCA AAATCTCCAT CGGTAAGATG GAGGGGATTG AAGAGCCACT GGCGCGGATC
GCCGGTAACA CTTATGTGAT GGATGCAGCC GCAACTTTAA TCACCAGCGG CATTATGATG
GGCGAGAAAC CGGCCGTCTT GTCTGCCATT GTTAAATATC ACTGTACACA CCGTGGTCAA
CGCGCCGTGA TGGATGCCAT GGATATCGCC GGTGGTAAAG GGATCTGCCT TGGCCCCGCT
AACTTTGTCG CCCGTGGTTA TCAGGGCGCA CCCATCGGTA TCACCGTCGA AGGCGCAAAT
ATTCTGACCC GCAGTATGAT TATCTTTGGT CAGGGTGCTA TCCGTTGCCA TCCATTTGTT
CTCGATGAGA TGGCGGCTGC GCAATCCAAT GACGTTGCCG CTTTCGATAA AGCCCTGTTT
GGTCACTTGG GCCACGTCGG TAGTAGTATG GTACGCAGCT TCTGGCTGGG CCTGACCAAT
GGCCGCACCA GTGCAACACC AGTCAAAGAC AGCACCCGTC GTTATTATCA ACAACTAAAC
CGTCTGAGCG CTAACTTGGC CTTGCTGTCT GATGTTTCAA TGGGCGTGCT GGGTGGTAGC
CTAAAACGTC GCGAACGTAT CTCTGCCCGT TTGGGTGATA TCCTCAGCCA ACTGTATTTA
GCATCCGCCA CACTGAAACG CTATGAAGAT GAAGGCCGTC AGAAAGAGGA TCTGCCGTTG
GTACATTGGG GGGTACAAGA TGCTCTGTAT CAGGCCGAAC AAGCACTGGA TGACTTGCTG
CGTAACTTCC CGAATAGCGT GATTGCTGGA TTGATGCGCG TCGTGGTCTT CCCGTTGGGC
CGTGTACATC GGGCACCGTC CGATCATCTG GATCACCAGT TGGCGCAATT GCTACAAGTT
CCATCAGCCA CCCGTAGCCG TATCGGTCGT GGTCAGTACC TGACACCAAG TGAATTTAAC
CCGGTAGGGT TATTGGAAGC GGCCTTACTG GATGTGATTG CCGCAGAACC GATTCACAAA
CGCCTGAGTA AAGAAGCGGG TAAGAGCCTG CCCTTTACTC GCTTGGATCA GTTAGCTAAA
CACGCCTTGG CAGAAGGGAA AATCAGCGCC GAAGAGGCCG CGTTGCTGAC TAAAGCAGAA
AACAGCCGCC TGCGTTCTAT TAATGTGGAT GAGTTTGACG CCAGCGCCTT GGCAGCAAAC
CCAGTAGTCA AAAAACCGGC TAAACAGCAG CAAACTGAAG CCGCATGA
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| Protein sequence | MIVLSIVALL VLISVLFYHR VNLYLSSLIL LVYTAALGAS QLWSFWVLLP MVIILLPLIL
TPLRKSLFSA PALRIFRSVM PAMSRTEKEA IDAGTTWWEG DLFRGAPDWK KLHNYPKPQL
TAEEQAFIDG PVEEACRMAN DFQITHELAD LPPELWDYLK EKRFFAMIIK KEYGGLEFSA
YAQARVLQKL AGVSGILAIT VGVPNSLGPG ELLQHYGTEE QKNHYLPRLA RGDEIPCFAL
TSPEAGSDAG AIPDVGIVCM GEWQGKQVLG MRLTWNKRYI TLAPIATVLG LAFKLSDPEH
LLGDTVDLGI TCALIPTHTP GVEIGHRHFP LNIPFQNGPT RGNDIFVPID YIIGGPQMAG
QGWRMLVECL SVGRGITLPS NATGSLKSVA MGIGAYAYIR RQFKISIGKM EGIEEPLARI
AGNTYVMDAA ATLITSGIMM GEKPAVLSAI VKYHCTHRGQ RAVMDAMDIA GGKGICLGPA
NFVARGYQGA PIGITVEGAN ILTRSMIIFG QGAIRCHPFV LDEMAAAQSN DVAAFDKALF
GHLGHVGSSM VRSFWLGLTN GRTSATPVKD STRRYYQQLN RLSANLALLS DVSMGVLGGS
LKRRERISAR LGDILSQLYL ASATLKRYED EGRQKEDLPL VHWGVQDALY QAEQALDDLL
RNFPNSVIAG LMRVVVFPLG RVHRAPSDHL DHQLAQLLQV PSATRSRIGR GQYLTPSEFN
PVGLLEAALL DVIAAEPIHK RLSKEAGKSL PFTRLDQLAK HALAEGKISA EEAALLTKAE
NSRLRSINVD EFDASALAAN PVVKKPAKQQ QTEAA
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