| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3163 |
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| Symbol | nqrD |
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| ID | 5384297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 3561367 |
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| End bp | 3561996 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640866170 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001402123 |
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| Protein GI | 153949616 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 0.468855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTGATA GCAAAGAGAT TAAACGGGTC TTATTAAGCC CATTGTTTGA TAACAACCCG
ATTGCCTTGC AAATCCTTGG GGTTTGCTCA GCACTGGCGG TGACCACTAA GCTGGAGACA
GCATTAGTGA TGACTCTGGC AGTCACGCTG GTGACTGCGT TTTCGAGTTT CTTCATCTCA
TTGATTCGAA ATCACATCCC AAACAGCGTA AGGATTATCG TTCAGATGGT CATCATTGCT
TCGCTGGTGA TTGTGGTAGA CCAGGTATTA CGTGCTTATG CCTATGAAAT TTCCAAGCAG
TTGTCGGTGT TCGTTGGCTT GATTATTACG AACTGTATCG TCATGGGCCG TGCTGAAGCT
TATGCGATGA AATCACCGCC AATTGAAAGT TTTATGGATG GTATCGGTAA TGGCCTGGGG
TACGGCGTAA TACTGGTTTT GGTCGGTTTT GTCCGCGAAT TGGTTGGTTC AGGCAAGCTA
TTTGGCGTGA CGGTATTGGA AACGGTGCAA AACGGTGGGT GGTATCTGCC TAACGGATTA
TTCCTGCTGG CACCTAGTGC ATTCTTTATT ATTGGTCTGC TGATTTGGGG CCTACGGACC
TTGAAACCTG CGCAGATTGA GAAGGAGTAA
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| Protein sequence | MADSKEIKRV LLSPLFDNNP IALQILGVCS ALAVTTKLET ALVMTLAVTL VTAFSSFFIS
LIRNHIPNSV RIIVQMVIIA SLVIVVDQVL RAYAYEISKQ LSVFVGLIIT NCIVMGRAEA
YAMKSPPIES FMDGIGNGLG YGVILVLVGF VRELVGSGKL FGVTVLETVQ NGGWYLPNGL
FLLAPSAFFI IGLLIWGLRT LKPAQIEKE
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